Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0921 ATGGCCATAACCGCCACCATTTCCGTTCCAGTTTCAACACCCATTCACCGCTCTCTTCCCGCTGTCAATCTCTTCCGCTCTTCTTCTTCTTTCGCCCCACCGCAACGCACTTTCAACTACCTCAACTCTCGCCTCGTTGCTTCCTCCATGAGCACCGAAGCCCCCGTCAAAACAACCTCCTCCTCCGCCGCTTCATCCCTGAACTCCGGCAGTGGCTTCCTCCATTTCGCCAAGTATCACGGTCTCGGCAACGATTTCGTTTTGATTGATAATAGAGATTCTTCAGAGCCTAAGATCAGCTCAGAGAAAGCTGTGCAAATTTGTGATCGTAATTTTGGTGTTGGGGCTGATGGGGTTATCTTTCTATTACCTGGCATCAATGGCACTGACTATACCATGAGGATTTTCAACTCTGATGGTAGTGAACCTGAGATGTGTGGCAATGGAGTGCGGTGCTTCGCTAAATTCATTTCCCAGGTTGAGAATATACATGGGAGGCATAGTTTTACTATACATACTGGTGCTGGCCTGATTGTTCCTGAAGTCTTGGAGGATGGAAATGTCAGAGTCGATATGGGGGAGCCGGTTCTTAAAGCATCAGATGTACCTACTAAATTACCTGCAAATAAGGATGGAGCTGTTGTTAAATCAGAGCTAGATGTAGATGGAGTTATCTGGAATGTGACTTGTGTTAGCATGGGAAATCCACACTGTATCACCTTCAGTAGAAAAGGAAGCCAGAGCTTGCTTGTTGATGAATTGAAGCTAGCAGAAATTGGTCCGAAATTTGAACATCATGAGATGTTCCCTGCACGAACTAACACAGAGTTTGTGCAAGTTTTGTCTAATTCACACCTGAAGATGCGTGTTTGGGAGCGTGGAGCAGGAGCAACACTTGCCTGTGGAACTGGAGCTTGTGCTCTTGTTGTAGCAGCAGTTCTTGAGGGTCATACTGGAAGAAATTGCACGGTTGATCTCCCTGGAGGGCCTCTTCAGATTGAATGGAGGGAAGAAGATAATCATGTCTATATGACAGGCTCCGCAGATCTAGTGTATTACGGATCTTTGCCCCTTTGA 1077 0.4661 MAITATISVPVSTPIHRSLPAVNLFRSSSSFAPPQRTFNYLNSRLVASSMSTEAPVKTTSSSAASSLNSGSGFLHFAKYHGLGNDFVLIDNRDSSEPKISSEKAVQICDRNFGVGADGVIFLLPGINGTDYTMRIFNSDGSEPEMCGNGVRCFAKFISQVENIHGRHSFTIHTGAGLIVPEVLEDGNVRVDMGEPVLKASDVPTKLPANKDGAVVKSELDVDGVIWNVTCVSMGNPHCITFSRKGSQSLLVDELKLAEIGPKFEHHEMFPARTNTEFVQVLSNSHLKMRVWERGAGATLACGTGACALVVAAVLEGHTGRNCTVDLPGGPLQIEWREEDNHVYMTGSADLVYYGSLPL* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0921 358 PANTHER DIAMINOPIMELATE EPIMERASE, CHLOROPLASTIC 36 357 - -
Lja1g0921 358 Hamap Diaminopimelate epimerase [dapF]. 74 358 IPR001653 GO:0008837|GO:0009089
Lja1g0921 358 Gene3D Diaminopimelate Epimerase; Chain A, domain 1 209 342 - -
Lja1g0921 358 SUPERFAMILY Diaminopimelate epimerase-like 218 356 - -
Lja1g0921 358 PANTHER DIAMINOPIMELATE EPIMERASE, CHLOROPLASTIC 36 357 IPR001653 GO:0008837|GO:0009089
Lja1g0921 358 Pfam Diaminopimelate epimerase 230 350 IPR001653 GO:0008837|GO:0009089
Lja1g0921 358 Pfam Diaminopimelate epimerase 76 197 IPR001653 GO:0008837|GO:0009089
Lja1g0921 358 SUPERFAMILY Diaminopimelate epimerase-like 74 203 - -
Lja1g0921 358 TIGRFAM DapF: diaminopimelate epimerase 75 356 IPR001653 GO:0008837|GO:0009089
Lja1g0921 358 ProSitePatterns Diaminopimelate epimerase signature. 137 151 IPR018510 GO:0005737|GO:0008837|GO:0009089
Lja1g0921 358 Gene3D Diaminopimelate Epimerase; Chain A, domain 1 46 204 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0921 K01778 - gmx:100784731 607.06