Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0865 ATGGCAAAGGCAAATCTATCCCATCTCCTCCCTCTCCTCCTCCTCAACATGTTCCTCTTCCTCTTCCAAACAATCTCTGCTCAAACAGCAGCAGCTCCAGCACCAGCAGGACCCACCAACATCACCCAAATCCTTGAGAAAGCAGGGCAATTCACAACCTTCATCAAGATTCTCAAAGCAACCCAAGTAGCTGACCGCATCAATTCTCAGCTCAACAACTCAAACCAAGGCCTCACCATTTTCGCACCCACAGACAACGCCTTCTCCAGTTTAAAACCAGGGACATTGAACTCCATCAACACACAGGACCAATTGCAGCTTATTCAGTTCCATATTCTTCCTACACTCTACTCAATGTCACAGTTCGAAACCGCCAGTAACCCGTTGCACACACAGGCTGGGAACAGTGGCGACGGTGAGTACCCTCTGAACGTGACCACCTCAGGGAACCAGGTGAACATAACAACAGGGGTGGTCGAGACCACCGTGTCCAACACTATCTACAGTGATAAGACGCTCGCGGTGTATCAGGTGGAGAAGGTGCTCCTTCCTCTGGCGCTTTTTGGCCAAGCTCCAACCGCCGCGCCGGCGGAGGCTCCGGCGCCGACCAAGCCGGAGAAAAATGTCCGGGCTTCTGATTCTCCATCTGGGTCGTCGTCGGATGCATCAGTTGATACTTCCAGTGCGGTGGGTGTCAGTGTCACCTACATTGGTGCAGTTGTTGCTGCCATTGTTGTTTCTTGTTTGTGGATGTAA 756 0.5185 MAKANLSHLLPLLLLNMFLFLFQTISAQTAAAPAPAGPTNITQILEKAGQFTTFIKILKATQVADRINSQLNNSNQGLTIFAPTDNAFSSLKPGTLNSINTQDQLQLIQFHILPTLYSMSQFETASNPLHTQAGNSGDGEYPLNVTTSGNQVNITTGVVETTVSNTIYSDKTLAVYQVEKVLLPLALFGQAPTAAPAEAPAPTKPEKNVRASDSPSGSSSDASVDTSSAVGVSVTYIGAVVAAIVVSCLWM* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0865 251 Gene3D FAS1 domain 21 184 IPR036378 -
Lja1g0865 251 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11 9 246 - -
Lja1g0865 251 ProSiteProfiles FAS1/BIgH3 domain profile. 38 182 IPR000782 -
Lja1g0865 251 MobiDBLite consensus disorder prediction 209 225 - -
Lja1g0865 251 Pfam Fasciclin domain 50 184 IPR000782 -
Lja1g0865 251 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 9 246 IPR045003 -
Lja1g0865 251 SMART fasc_3 79 185 IPR000782 -
Lja1g0865 251 SUPERFAMILY FAS1 domain 35 184 IPR036378 -
Lja1g0865 251 MobiDBLite consensus disorder prediction 195 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0865 Lja-Chr1 8514154 8515290 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0865 - - mtr:MTR_7g101080 325.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0865 1 8514154 8515290 Lja1g0865 1 8514154 8515290 ECH