Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0813 ATGGGTATATTGCAGGATGATGTGGTGATTATCAGGCCACCAGAGAAAGAAGGTGAAGCAACTGTGATAACAGTGAATTGTCCCGACAAGACTGGTCTAGGTTGTGATTTGTGTCGCATAATACTGTTTTTTGGTCTTAGCATTGTCCGAGGAGATGTGTCTACTGATGGGATATGGTGCTACATAGTTTTTTGGGTGGTGGGGAAGCAGAAGACAAGGTGGAGTTTGTTGAAGAAGAGGCTAATTGGGGCATGTCCTACTTGTTCTTCAGCTTCTGGAATTTCTTATTACTGCTCTGACTTGCAGCCTCCCAAGCCCCCTGATGTGTTCCTTTTGAAATTCTGTTGCCATGATCGTAGTGGCCTTTTACATGATGTCACCGAGGTTCTTTTTGAGCTAGAGCTTACCATAAAGAAAGTGAAGGTGTCTACTACACCTGATGGCAAAGTGGTGGATCTGTTTTTCGTCACGGATACCAGGGAACTTCTACATACAAAGAAGAGAAAGGATGACACAATTGAGCAGTTAACAGCCGTTTTGGATGATCCCTTAATCACCATTGACATTCGATTGATTGGCCCTGAAACTACTGCTTGTTCTCAAGCATCTTCATTTCTTCCAAATGCAATCACAGAGAATGTCTTTGAATTGGAAAGTTGGACTTCCACATCAAATTCTGTTTCGATTGAGATGGACAACATGCTGAGTGCTGCTCACACGCTTGTCCAAATCGTGTGCCGCAATCACAAAGGTCTTATTTATGACATCATGAGAACTATGAAGGACTACAATGTTCAGATTTCGTATGGGAGATTAGCAACAAAACCTACAGGAAAATGTGAGATTGACTTGTTCATCATGCAAGCAGATGGGAAAAAGATAGTTGACCCCAGCAAGCAGATGTCTTTGTCATCGCGCCTTCGGATGGAACTACTTCATCCGCTCAAAGTGGCTGTTATTAGCAAGGGACCTGATACAGAGCTTCTGGTTGCAAACCCTGTGGAGTTGTCCGGCAAAGGAAGGCCTCTTGTTTTTTATGACATTACTCTTGCTCTCAAAATGCTTGGCCTTGTCGTCTTCTCGGCTGAAGTTGGAAGACATATGATTGGAGATCGCGAGTGGGAAGTTTATAGAGTCTTGCTTGATGAAGGAGGGGAAGGTTTATCTGTTCCAAGGGACAAGATTGAGCAAGGAGTTTGGAACATGTTGATGGGTTGGGAGTAG 1224 0.4371 MGILQDDVVIIRPPEKEGEATVITVNCPDKTGLGCDLCRIILFFGLSIVRGDVSTDGIWCYIVFWVVGKQKTRWSLLKKRLIGACPTCSSASGISYYCSDLQPPKPPDVFLLKFCCHDRSGLLHDVTEVLFELELTIKKVKVSTTPDGKVVDLFFVTDTRELLHTKKRKDDTIEQLTAVLDDPLITIDIRLIGPETTACSQASSFLPNAITENVFELESWTSTSNSVSIEMDNMLSAAHTLVQIVCRNHKGLIYDIMRTMKDYNVQISYGRLATKPTGKCEIDLFIMQADGKKIVDPSKQMSLSSRLRMELLHPLKVAVISKGPDTELLVANPVELSGKGRPLVFYDITLALKMLGLVVFSAEVGRHMIGDREWEVYRVLLDEGGEGLSVPRDKIEQGVWNMLMGWE* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0813 407 SUPERFAMILY ACT-like 107 181 IPR045865 -
Lja1g0813 407 SUPERFAMILY ACT-like 18 81 IPR045865 -
Lja1g0813 407 Gene3D - 108 191 - -
Lja1g0813 407 ProSiteProfiles ACT domain profile. 111 194 IPR002912 -
Lja1g0813 407 PANTHER FOUR ACT DOMAIN ACT DOMAIN PROTEIN WHICH PROTEIN 2 407 - -
Lja1g0813 407 Pfam ACT domain 112 167 IPR002912 -
Lja1g0813 407 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 2 407 IPR040217 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0813 Lja-Chr1 7912658 7915916 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0813 - - gmx:100797226 696.812
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0813 1 7912658 7915916 Lja1g0813 1 7912658 7915916 ECH