Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0790 ATGGCACAGAAACATGGAATGGACTCAGTACCTCTATGCCCCCTCCACTTTGTGTTCATCCCCTTAATGGCCCCGGGTCATATTATTCCTTTGGTAGACATGGCCAAGTTGTTTGCACGACGCAAGGTCAAAGTGAGCATAGTCACTACACCCCTTAATTCCATCCAATTCCGAGACACCATAGACAGAGAGATTCAATCTGGGTCACCCATCCAAATTCTGCATGTTCCATTTCCAAATGCAGAGTCTGGAATTCCTGAGGGGTGTGAGAGCGTGGATACTCTTCCTTCAATGGCTCTGCAAACAAACTTTTACACCGCTTTACGCTTGTTGCAGCGACCACTAGAAGATCTGTTTGAAAAGCTAAGACCCGTCCCAAGCTGCATAATAGCTGACAAAAGTCTTTCATGTGTAGCTGATATTGCAGACAAGCTCAAAGTTCCAAGAATAATATTTGATGGGACTAGTTGTTTCAATTTCATATGCAATCACAATTTACTTAAGATCTCTGAGGCTATATCTGATGACGAGAAATTTCTTGTCCCTGGAATACCTCATGAAATAGAATTGCGAAGATGCCAGCTCCCCGGGATATTCAATCCTTACACAGACAAAAGGCTGACTGCTTTCCGTGAGGAAATAAGGGTGAAGGCAGAAAAATCATACGGGGTGGTGGTCAACAGTTTTGAAGAATTAGAGGCAGAATATGTTAAAGACTATCAAAGGGTAGCAGGCCATAAGGTTTGGTGTGTTGGCCCTGTATCACTATCCAACAAAGACGAATTGGACAAAGCTCAGAGAGGAAACGGAAACTCAAATGGTGCAAGTCAAATTCTGAAGTGGCTAGATTCATGGCCTCCAAGCTCTGTGATTTATGCGTGCCTCGGTAGCCTGAACTGTGCAACACCAAAACAGTTGATAGAGGTCGGGTTGGGACTCGAAGCAACAAAAAGACCGTTCATTTGGGTGCTGAGAGGTGCCTATGGAAGAGAGGAAATGGATAAGTGGCTTCTAGAAGAAGGGTTTGAGGAAAGACTGAAAGGGAGAGGACTTTTGATCAAGGGTTGGGCACCACAAGTGTTGATATTGTCACACAAAGCAATAGGAGCGTTCTTGACACATTGTGGATGGAACTCCACACTAGAAGGGATTTGTGCTGGAGTGCCCCTGGTCACTTTTCCTCAGTTTGCTGAGCAGTTTTATAATGAGAAAGTCATTGCACAAGTGGTGGAGACTGGGGTGGGTGTGGGAGCTGAAACTGTCGTCCACTTGGGAGAGGAAGACGAGAGTCGTGTTCAGGTCAAGAGGGAAAGTATTAGAGATTCAGTAGAGAAGGTAATGGGTGAGGGCAAAGAAAAAGAAAAGATGAGGGAAAGAGCTAGAAAGTATGCAGACATGGCAAGGAAAGCAATAGAAGAAGGAGGATCTTCTTACCGCAACATTTCTCTTCTAATTGAAGATATCATACATGTTCAAGGGCTAGACTAG 1488 0.4456 MAQKHGMDSVPLCPLHFVFIPLMAPGHIIPLVDMAKLFARRKVKVSIVTTPLNSIQFRDTIDREIQSGSPIQILHVPFPNAESGIPEGCESVDTLPSMALQTNFYTALRLLQRPLEDLFEKLRPVPSCIIADKSLSCVADIADKLKVPRIIFDGTSCFNFICNHNLLKISEAISDDEKFLVPGIPHEIELRRCQLPGIFNPYTDKRLTAFREEIRVKAEKSYGVVVNSFEELEAEYVKDYQRVAGHKVWCVGPVSLSNKDELDKAQRGNGNSNGASQILKWLDSWPPSSVIYACLGSLNCATPKQLIEVGLGLEATKRPFIWVLRGAYGREEMDKWLLEEGFEERLKGRGLLIKGWAPQVLILSHKAIGAFLTHCGWNSTLEGICAGVPLVTFPQFAEQFYNEKVIAQVVETGVGVGAETVVHLGEEDESRVQVKRESIRDSVEKVMGEGKEKEKMRERARKYADMARKAIEEGGSSYRNISLLIEDIIHVQGLD* 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0790 495 Coils Coil 453 473 - -
Lja1g0790 495 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 15 493 - -
Lja1g0790 495 ProSitePatterns UDP-glycosyltransferases signature. 356 399 IPR035595 -
Lja1g0790 495 Gene3D Glycogen Phosphorylase B; 279 472 - -
Lja1g0790 495 PANTHER GLYCOSYLTRANSFERASE 14 492 - -
Lja1g0790 495 PANTHER GLYCOSYLTRANSFERASE 14 492 - -
Lja1g0790 495 CDD GT1_Gtf-like 15 467 IPR002213 GO:0008194
Lja1g0790 495 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 289 409 IPR002213 GO:0008194
Lja1g0790 495 Gene3D Glycogen Phosphorylase B; 14 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0790 Lja-Chr1 7617207 7618694 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0790 15 491 Glycosyltransferase AT2G36780 49.275 2.45e-167 480
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0790 - K13496 gmx:100820150 723.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0790 1 7617207 7618694 Lja1g0790 1 7617207 7618694 ECH