Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0789 ATGCATGCAATGGACTCCTCAAAATCTCTATGCCACCTTCATTTTGTCTTCATCCCTTTAATGGCCCCTGGTCATCTTCTTCCAATGGTAGACATGGCCAAGCTATTTGCACGCCGCAATGTCACAGTGAGCATAGTCACCACACCCCTCAACTCAATCCAATTCAGAGACACCATAGATAGAGAGATTCAATCTGGCTCACCAATCCAAATTCTGCATGTTCCATTTCCAAATGCTGAATCTGGAATACCTGAAGGGTGTGAGAGTGCGGATACTCTGCCTTCAGTGGATCTCTTTGAAAACTTCTTCGTCGCTCTACGCTTGTTGCATCAGCCACTGGAAGAGCTTCTTGAAAATCTAACACCAATGCCAAGCTGTATAATCGCTGATAAACATGTTATGTGTGTTGCTGATATTGCCAAGAAGTTGAATGTTCCGAGAATAACATTTGATGGGACTAGTTGCTTCACTCACCTCTGCAATCGCAATTTACATGAGGCTTTCCCTGATGAAGACAAATTTCTTGTCCCTGGATTGCCCCATAGAGTAGAATTGCGAAAATGTCAACTTCCACCTGAGTTCTTGAAAACAAACACAAAGATTGATACTTACCGTAAGGAAGTAAGGGTGGTAGCAGAAAAAACACATATGGTGGTGGTTAATAGTTTTGAAGAATTAGAGGCAGAGTATGTGAAAGAGTATCAAAGGGTCACAGGTCGGAAAGTTTGGTGTGTTGGTCCGGTATCACTATCCAACAAGGATGAATTGGACAAAGCTCAAAGAGGAATGAGAAATTCAAATGACTTGAGCCAAATTCTGAAGTGGCTTGATTCATGGCCTCCAAGCTCAGTGATTTATGTCTGCCTTGGTAGTCTCAACCGCGCAACACCGAAGCAGTTGATAGAGATCGGTTTGGGACTGGAAGCGACGAAAAGGCCATTCATTTGGGTGCTGAGAGGTGCATATGGAAGAGAGGAATTGGAAGAGTGGCTCTTGGAAGAAGGGTTTGAGGAAAGGGTGAAAGGGAGAGGACTTTTGATTAAGGGTTGGGCACCACAAGTGTTGATATTGTCACACAGTGCAATAGGAGCTTTCTTGACACATTGTGGATGGAATTCAACACTGGAGGGGATTTGTGCTGGGGTGCCATTGATCACTTTTCCTCTGTTTGCTGAGCAGTTTTATAATGAGAGAGTTGTTGTGCAAGTGGTGGAGACTGGGGTGAGTTTGGGAGCTGAAGCTGTTGTGCATTTGGGAGAGGAAGAAGGGAAGAGTTATGTTCAGGTGAAGAGGGAAAGTGTTAGGGATTCTATAGAGAAGGTAATGGGTGAGGGTGAAGAGAAAGAGAAGATGAGGGAAAGAGCTAGGAGGTATGCTGAGATGGGAAGGAAAGCGATTGAAGAAGGAGGGTCTTCTTACCACAACATTTCTCTTCTAATTGAAGACATAATAATGCATGTTCAGGGTTGA 1470 0.4401 MHAMDSSKSLCHLHFVFIPLMAPGHLLPMVDMAKLFARRNVTVSIVTTPLNSIQFRDTIDREIQSGSPIQILHVPFPNAESGIPEGCESADTLPSVDLFENFFVALRLLHQPLEELLENLTPMPSCIIADKHVMCVADIAKKLNVPRITFDGTSCFTHLCNRNLHEAFPDEDKFLVPGLPHRVELRKCQLPPEFLKTNTKIDTYRKEVRVVAEKTHMVVVNSFEELEAEYVKEYQRVTGRKVWCVGPVSLSNKDELDKAQRGMRNSNDLSQILKWLDSWPPSSVIYVCLGSLNRATPKQLIEIGLGLEATKRPFIWVLRGAYGREELEEWLLEEGFEERVKGRGLLIKGWAPQVLILSHSAIGAFLTHCGWNSTLEGICAGVPLITFPLFAEQFYNERVVVQVVETGVSLGAEAVVHLGEEEGKSYVQVKRESVRDSIEKVMGEGEEKEKMRERARRYAEMGRKAIEEGGSSYHNISLLIEDIIMHVQG* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0789 489 CDD GT1_Gtf-like 13 462 IPR002213 GO:0008194
Lja1g0789 489 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 280 403 IPR002213 GO:0008194
Lja1g0789 489 ProSitePatterns UDP-glycosyltransferases signature. 350 393 IPR035595 -
Lja1g0789 489 Gene3D Glycogen Phosphorylase B; 274 467 - -
Lja1g0789 489 Gene3D Glycogen Phosphorylase B; 12 273 - -
Lja1g0789 489 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 13 484 - -
Lja1g0789 489 PANTHER GLYCOSYLTRANSFERASE 11 486 - -
Lja1g0789 489 PANTHER GLYCOSYLTRANSFERASE 11 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0789 Lja-Chr1 7613339 7615524 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0789 13 488 Glycosyltransferase AT2G36760 50.308 2.67e-167 480
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0789 K13496 - gmx:100820150 678.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0789 1 7613339 7615524 Lja1g0789 1 7613339 7615524 ECH