Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0787 ATGCAACTCACCAACATCATGATTCATGCCATGGCTTCCCAAACTTACCAGCAACACTTCCTTCTTGTACCCTTCATGTCCCAAAGCCATCTTATTCCTTTTACACAGTTAGCCAAGTTACTTGCAGCCAATGGTATCACTGTCACCATTGTCCTCACACCCCTCAATGCAACCAGGTTCAACATGGTCATTGACCAAGCAAAAGCTTCCAACCTCAAAATCCACTTTAAGGTGCTACCCTTCCCCTGCAAAGAAGCAGGGTTACCAGAAGGGTGTGAAAACATGGACTCTGTCACTTCCCCTCAACACCAACCCTTGTTCTTTGCAGCTTGCAACATGCTTAAACAGCCACTTGAGAAATGGCTTTCAGAGCTGGAAACAGTACCAACCTGCATCATTTCAGATATTTGCCTTCCTTGGACTTCAAGTACTGCAACAAAGTTCAACATACCAAGGGTAATCTTCCATGGAATCTCTTGTTTCACCCTTTTGTGCTCACATAACATTAGCACTTCCAAGGTTCATGAGAGGGTCACCTCAATGTCTCAGCCATTTGTGGTGCCAGACTTGCCTGAGAGAATTGAATTCACAAAGGCACAGTTACCTGAAGCAATGATGAAGGACTCTGAGTCTTTGAAAGAAGCTATTGAACAATTCAAAAAGGCTGAACTTTCCTCACAAGGGATATTGGTGAACACTTTTGAGGAGTTGGAGATGATGTATGTTAGGGGGTATGAGAAAGTGGCAAGAAATGTTTGGTGTGTCGGACTACTTTCTTTATATGAAAAATTAATGTTGGAGAAGCTTGGGAGGGATGATAAACCATCCATGGATGAGTCAGAATGTGTAAAATTTCTTCTTTCTAACAAGCCTTGTTCTGTTATCTATGTCTGTTTTGGCAGCATGTCTCACTTTCAAGCTTCACAGCTAAAGGAGCTAGCTTTGGGATTGGAAGCATCAAACCATCCATTCATTTGGGTAATTGGAAAAAATGATTGTTCTGCTGAGCTAGAAAAATGGTTAGTAGGGGAGAATTTTACAGAGAGGAACAAGGGAAGGGGTGTCATAGTGAGAGGATGGGCACCACAAGTTGAGATACTGTTCCACCCTGCAACTGGAGGATTCTTGTCACACTGTGGTTGGAATTCCACACTGGAAGCAGTTTCTGCAGGTGTGCCAATGATAACTTGGCCAATGGTTGCTGAACAGTTCTTCAATGAGAAGCTCATTGTGCAAGTTCTGAAGACTGGTGTGAGGATTGGGGTTGAAGGTGGTGGGGATACCATTGTGAAGAAGGAGGATGTGAAGAAGGCTATTGAGCAGCTCATGGAGCAGGGTGGGGAAGGGGAACAGAGAAGGAACAGAGCCAAGAAACTAAAAGAAATGGCTCATAAGGCACTTGAAGATGGTGGATCTTCCTCTTCAAATTGCAAATCATTTATCCAACATATTGTGGGGCAAGTTCATAGTTAA 1473 0.4345 MQLTNIMIHAMASQTYQQHFLLVPFMSQSHLIPFTQLAKLLAANGITVTIVLTPLNATRFNMVIDQAKASNLKIHFKVLPFPCKEAGLPEGCENMDSVTSPQHQPLFFAACNMLKQPLEKWLSELETVPTCIISDICLPWTSSTATKFNIPRVIFHGISCFTLLCSHNISTSKVHERVTSMSQPFVVPDLPERIEFTKAQLPEAMMKDSESLKEAIEQFKKAELSSQGILVNTFEELEMMYVRGYEKVARNVWCVGLLSLYEKLMLEKLGRDDKPSMDESECVKFLLSNKPCSVIYVCFGSMSHFQASQLKELALGLEASNHPFIWVIGKNDCSAELEKWLVGENFTERNKGRGVIVRGWAPQVEILFHPATGGFLSHCGWNSTLEAVSAGVPMITWPMVAEQFFNEKLIVQVLKTGVRIGVEGGGDTIVKKEDVKKAIEQLMEQGGEGEQRRNRAKKLKEMAHKALEDGGSSSSNCKSFIQHIVGQVHS* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0787 490 PANTHER GLYCOSYLTRANSFERASE 13 487 - -
Lja1g0787 490 ProSitePatterns UDP-glycosyltransferases signature. 360 403 IPR035595 -
Lja1g0787 490 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 19 485 - -
Lja1g0787 490 PANTHER GLYCOSYLTRANSFERASE 13 487 - -
Lja1g0787 490 CDD GT1_Gtf-like 19 483 IPR002213 GO:0008194
Lja1g0787 490 Gene3D Glycogen Phosphorylase B; 10 270 - -
Lja1g0787 490 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 292 444 IPR002213 GO:0008194
Lja1g0787 490 Gene3D Glycogen Phosphorylase B; 280 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0787 Lja-Chr1 7599949 7601646 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0787 11 485 Glycosyltransferase AT2G36780 47.755 1.13e-157 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0787 K13496 - gmx:100777956 723.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0787 1 7599949 7601646 Lja1g0787 1 7599949 7601646 ECH