Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0786 ATGGCTTCCCAAGCACCTAAGCTTCACTTTGTCCTCTTTCCCCTCATGTCCCCAGGCCACATGCTCCCCATGATAGACCTTGCAACAATATTAGCACACCAGAACATAATTGTCACCGTTATCACAACCCCACACAACGCTGCTCGTTTCTCAGAAACCTTCACTCGCGCTTCCGAATCCGGCCTTCAACTCAGATTAGTCCAGCTCCAATTCCCATCTAAAGATGCTGGATTCCCAGAAGGGTGTGAGAATTTTGACATGCTTCCATCCATGAGCATGGGATATGATTTTTTCAAAGCAGCAAACACAATTCTGCAGGAACCAGCTGAAAAAGTGTTTGAAGAGTTAACACCAAATCCAAACTGCATAATATCTGATGTTAGTTTCCCATATACTGCTGAAATAGCCACCAAGTTCAATATTCCCAGGATTTCCTTCTATGGAGTGAGTTGCTTCTGTCTTCTCTGGCAGATGAATTTGTTAACCTCTCAGGTTCTGGAAAACACAGCCACAGATTCGGAATACTTCGCCATACCCGGAATTCCTGACAAAATTGAGATCACTAGAGCTCAGATGCCAAGTTCAAGTAATGGAAACTGGAAGGAGTTTGTTGACAAAATGGCTGCAGCTGAAATGGTTTCTTATGGGGTGGTGGTGAATTCTTTTGAGGAGTTGGAGCCAGACTATGCAAGGGATTTCAAGAAGGTTAAGAATGATAAACTCTGGTGTGTTGGCCCTGTGTCACTCAGCAACAGGAATCACCTGGATAAGGCTCAGAGAGGGAACAAGGCTTCAGTTGATATGGAAAGTTGCATGAAATGGCTTGATTTGCAAAATCCAAGTGGGGTTATCTATGTGTGCCTAGGAAGCATTTGCAATTTAAGTCCTTTGCAGTTTATTGAGATTGGTATGGCCTTAGAGGAATCTAATAGGCCATTCATTTGGGTTATAAGGGAAAGAAATCAAACAGAAGAGTTGAAAAGTTGGATTGAGGAATCTGGATTTGAGGAAAGGACTAAAGGGAGAGGACTTTTGATCAAGGGTTGGGCTCCTCAGGTATTGATACTATCACACCCTGCAATTGGAGGGTTCTTAACACACTGTGGTTGGAACTCAACCTTGGAAGCTGTATGTGCTGGTGTGCCAATGCTTACTTGGCCATTATTTGGAGACCAATTCTTCAATGAGAAGTTCATTGTGGAAATATTGAGAGTTGGGGTGAGTGTTGGAGTGGAGAGTCCTGTGAACTGGGGTGATGAAGAGAAAGCTGGGGTGTTGGTGAAGAAAGAAGATGTTCAGAATGCTATACAGAAGTTAATGGATGAGGCAAATGGAAGTGAAGAGAGAAGGGAAAGGGCTAAGAAACTTGCTGAGATGGCCAAGAGAGCTGTAGAAGAAGGAGGATCTTCTCACTCAAATGTGACACTACTAATCCAAGATATCATGCAACAGTCCAACTAA 1461 0.4346 MASQAPKLHFVLFPLMSPGHMLPMIDLATILAHQNIIVTVITTPHNAARFSETFTRASESGLQLRLVQLQFPSKDAGFPEGCENFDMLPSMSMGYDFFKAANTILQEPAEKVFEELTPNPNCIISDVSFPYTAEIATKFNIPRISFYGVSCFCLLWQMNLLTSQVLENTATDSEYFAIPGIPDKIEITRAQMPSSSNGNWKEFVDKMAAAEMVSYGVVVNSFEELEPDYARDFKKVKNDKLWCVGPVSLSNRNHLDKAQRGNKASVDMESCMKWLDLQNPSGVIYVCLGSICNLSPLQFIEIGMALEESNRPFIWVIRERNQTEELKSWIEESGFEERTKGRGLLIKGWAPQVLILSHPAIGGFLTHCGWNSTLEAVCAGVPMLTWPLFGDQFFNEKFIVEILRVGVSVGVESPVNWGDEEKAGVLVKKEDVQNAIQKLMDEANGSEERRERAKKLAEMAKRAVEEGGSSHSNVTLLIQDIMQQSN* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0786 486 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 280 400 IPR002213 GO:0008194
Lja1g0786 486 ProSitePatterns UDP-glycosyltransferases signature. 349 392 IPR035595 -
Lja1g0786 486 PANTHER GLYCOSYLTRANSFERASE 3 486 - -
Lja1g0786 486 Coils Coil 429 463 - -
Lja1g0786 486 CDD GT1_Gtf-like 8 473 IPR002213 GO:0008194
Lja1g0786 486 PANTHER GLYCOSYLTRANSFERASE 3 486 - -
Lja1g0786 486 Gene3D Glycogen Phosphorylase B; 6 272 - -
Lja1g0786 486 Gene3D Glycogen Phosphorylase B; 273 465 - -
Lja1g0786 486 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 8 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0786 Lja-Chr1 7598178 7599638 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0786 2 483 Glycosyltransferase AT2G36800 55.647 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0786 K13496 K22771 gmx:112997714 786.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0786 1 7598178 7599638 Lja1g0786 1 7598178 7599638 ECH