Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0779 ATGTTCAGATTCTGGGGATCGCAAGAGCAGCAGCAGCAGCAACAACAACAACCGCAGGATGGTTCTTCTTCACAGTCGTGGTATCCGCCGTCCGTGACGAGCTCGCCGAGGCCAGCCACGCCGACTTCCTCTTCGTCTTCATCTCAACAGAGGCCTTCTTCGCATGTTCCTCCTGCTGAAGCCGCTGGGATTATTTCTGCTTTGAAGGACAAGAGTGTTGATGAGTTACGGAAGCTTTTATCTGACAAAGATGCATATCAACAGTTTTTAAATTCGCTTGATCAGGTCAAGATTCAAAATAATCTGAAAGATGAACTTTGCAAGGAGAATTTGCAGCTTGCAGAGGAAAATCTACAAAAGGAACCTCGTATCATGGAACTTAGGAACCAATGTAGAATAATTCGGACAACCGAATTAGCCACTGCTAATGAGAAACTAAATGAGCTTGAGAAGCAGAAGGAAGAAATGATGAAGTTGAACTCCCCTGCATCTCTCCTCCAAAGGATTCAAGAGTCTATAAATAAGACAGATGAGGAATCGGAAAATCTGCACCAGAATCTCCTTGACGGAGAGATTGACCTCGGAGCCTTTTTGCAGAAATACAAGAAGCTACGTACCACTTATCACAGGAAAACGCTCATACATCTGGCTGCTAAAACATCAACTATATGA 672 0.442 MFRFWGSQEQQQQQQQQPQDGSSSQSWYPPSVTSSPRPATPTSSSSSSQQRPSSHVPPAEAAGIISALKDKSVDELRKLLSDKDAYQQFLNSLDQVKIQNNLKDELCKENLQLAEENLQKEPRIMELRNQCRIIRTTELATANEKLNELEKQKEEMMKLNSPASLLQRIQESINKTDEESENLHQNLLDGEIDLGAFLQKYKKLRTTYHRKTLIHLAAKTSTI* 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0779 223 PANTHER VACUOLAR PROTEIN-SORTING-ASSOCIATED PROTEIN 37 HOMOLOG 2 1 223 - -
Lja1g0779 223 PANTHER WILLIAMS-BEUREN SYNDROME CRITICAL REGION PROTEIN-RELATED 1 223 - -
Lja1g0779 223 Coils Coil 166 186 - -
Lja1g0779 223 MobiDBLite consensus disorder prediction 1 58 - -
Lja1g0779 223 ProSiteProfiles VPS37 C-terminal domain profile. 143 223 IPR009851 -
Lja1g0779 223 Gene3D Helix hairpin bin 147 215 IPR029012 -
Lja1g0779 223 Pfam Modifier of rudimentary (Mod(r)) protein 69 212 IPR009851 -
Lja1g0779 223 MobiDBLite consensus disorder prediction 1 55 - -
Lja1g0779 223 SUPERFAMILY Endosomal sorting complex assembly domain 161 211 IPR037202 -
Lja1g0779 223 Coils Coil 139 159 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0779 K12185 - gmx:100305851 318.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0779 1 7545613 7550409 Lja1g0779 1 7545613 7550409 ECH