Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0740 ATGAAGATTCAATCCATACTCATTCTTCTTCTCTCCCTTCAGATTTCGTTAATATGTCATGCAGAAGATGCAGCAACAGCAACTCCCATTCCACAAGAGCTTCTCACTGGTTTCTCAGCAGTCCCACAACCCACAACGACGCCGTTTCAGGCCATTCTGACCGACCCCACCGGAAACTTCTCGTTAGGTTTCCTCCGGCAGAACCAAAACCAGCTCAAACTCGCCGTCATCCACGTAGCTTCCTCGGAACCATTCTGGGTCGCCAACCCGACCCGGCTCGCATCATGGGCCCACACCACGCGCCTCTCCTTCAACGGCAGCCTTGTGTTGTCGGACTCAAAAACCGGCGTGTCCTGGTCCACCGCCACCAACGGCCACCGCGCCGTGCTCCTCAACAACTCCAACCTGCAAGTTCAAAACAGAGCCACCCAAACCCCCATCTGGGAAAGCTTCCATTTCCCCACCAACACGCTAGTTCAGGACCAGAATCTCACCGCCGACAAGTCTCTGGTTTCCTCCAACGGCCTCTACTCTTTCCGGTTAGGCGACGATTTCATGGGCCTGTACACAAATCTCAACGGCGGAAAGCGGTTACTATACTGGAAGCACACGGCGATGGAAGCGAAAGATGAGGTCAAGGAAGGGGAGGGGCCGATTTACGCCAGAGTCAACTCGGAAGGTGGGTATCTCGGGATGTACCAAACGAGTTCAAAACCAGTCGATGTTCAGAAGTTCAGCACGTTCCAACAGGATTCCACAACGTCGTCGTTTTTGTTGGTGCGTTTGGAAACGGACGGGAATCTCAAAGGGTATTACTGGAACGGTTCGAACTGGATGCTGAACTATGAAGCCATTGGTGAAACTTGCGAGCTTCCTAATCCATGCGGTTCGTATGGTTTGTGTACGCCTGGTGGAGCTGGGTGTTCTTGTTTGGATAATCAGACCCGGTTTGAATCGGGTGGGTGTGAGGGTGGTGGTGGTGGTGATTTGTGCGGTGGGAGAGGGTTTGGTGGAGGAGAGAGTTACCGGGTTTTGAGGAGGAGTGGGGTGGAGCCGCCGCATAAGGAGCTGGTTGCGCACGTGACGACGGCATCTTTGGCGGGTTGTGAGGGGTTGTGTGAGAGAAATTGTAGTTGTTGGGGGGTGTTCTATAGTAATGCTACCGGGTTTTGTTATGTTTTGGATTACCCGGTTGGGACGGTTTTGGGTACCGGGGATGGGTCGAAGGTGGGTTATTTTAAGGTCAGGGAAGGTGGCGAGGGGAGGAATCGGGTCGGGGCGCGAGTTGGGATTGTGGTTGGGGTGTTGGTTTTGATTGGGGTGGTTATTTTTGGGGTTGGGTTGTGTGTGAAGAGGTTGCAAAGGAGGAGAGGGGTGAGTGGCGGGATGTTGAAGGAGGAGAATGGCCATGGGGCTTCGCCCGGCCCGTATCGGAATCTCAAATCCGCAAGTTTTAGATCCATCGAGATGTCCGTGCCAATCAGTAGATAA 1491 0.5352 MKIQSILILLLSLQISLICHAEDAATATPIPQELLTGFSAVPQPTTTPFQAILTDPTGNFSLGFLRQNQNQLKLAVIHVASSEPFWVANPTRLASWAHTTRLSFNGSLVLSDSKTGVSWSTATNGHRAVLLNNSNLQVQNRATQTPIWESFHFPTNTLVQDQNLTADKSLVSSNGLYSFRLGDDFMGLYTNLNGGKRLLYWKHTAMEAKDEVKEGEGPIYARVNSEGGYLGMYQTSSKPVDVQKFSTFQQDSTTSSFLLVRLETDGNLKGYYWNGSNWMLNYEAIGETCELPNPCGSYGLCTPGGAGCSCLDNQTRFESGGCEGGGGGDLCGGRGFGGGESYRVLRRSGVEPPHKELVAHVTTASLAGCEGLCERNCSCWGVFYSNATGFCYVLDYPVGTVLGTGDGSKVGYFKVREGGEGRNRVGARVGIVVGVLVLIGVVIFGVGLCVKRLQRRRGVSGGMLKEENGHGASPGPYRNLKSASFRSIEMSVPISR* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0740 496 ProSiteProfiles Bulb-type lectin domain profile. 38 151 IPR001480 -
Lja1g0740 496 PANTHER - 37 483 - -
Lja1g0740 496 Pfam S-locus glycoprotein domain 247 312 IPR000858 GO:0048544
Lja1g0740 496 Pfam D-mannose binding lectin 85 178 IPR001480 -
Lja1g0740 496 Gene3D - 42 152 IPR036426 -
Lja1g0740 496 PIRSF SLG 1 428 IPR035446 -
Lja1g0740 496 PANTHER OS11G0149900 PROTEIN 37 483 - -
Lja1g0740 496 SMART blect_4 43 154 IPR001480 -
Lja1g0740 496 SUPERFAMILY alpha-D-mannose-specific plant lectins 84 202 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0740 Lja-Chr1 7170931 7173132 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0740 - - gmx:100814305 585.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0740 1 7170931 7173132 Lja1g0740 1 7170931 7173132 ECH