Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0729 ATGGCGTCGAGATTTTCATGGGGTGAGGATATGGCCATAGGGGGAAGAAACCACCTAAGCTTGCCGTCAAGGAGTTTCAGTGCAGGGTGGAGTGTACCGCCTTCTCCTGCAAACTCGCTCAGCAGCTTCAGCATGCGGTGGCGCGAAGACAACGAAAATGATAACGATGAAGAACTGAAATGGGCTGCTATAGAGCGTTTGCCAACGTACGATCGCTTGAGAAAAGGGGTGCTGAAGATCATGCATGATAATGGAAAAATTGTTCATTGCCCAATTGATGTTACCCATCTTGGGATGCAAGATAAGAAGATCCTCCTCGACAGTATTCTAAACATCGTCGAGGAGGATAATGAGAAATTCCTACGGGTACTCAGAAGCCGAATTGATAGAGTGGAGATTAAACTTCCAAAAATTGAAGTGCGATACGAGAATTTATCAGTGGAGGGAGATGTTCATGTTGGACGCAGAGCACTTCCTACCTTACTTAATTTTGTTCTTAACGCTCTTGAGAGTGCTATAGGAAGATTTCACCTCACACCTTCCAATAAGACAAGTGTTCAAATTCTTAAAGATGTTAGTGGGATTGTCAAACCATCAAGAATGACACTACTTCTAGGTCCGCCGGGTGCAGGGAAAACAACACTACTTCTGGCACTTGCAGGGAAACTTGATCATGATTTAAGGACTCATGGGAGAATCACTTATTGTGGGCATGAATTGAATGAATTCATTGCTCAAAAAACATGTGCCTACATTAGTCAACATGACCTTCATTATGGAGAAATGACAGTGAGAGAGACGTTGGATTTTTCAGGAAGGTGTTTAGGTGTTGGGACGAGGTATGAAATGTTGGAGGAGCTTTCAAGAAGGGAGAAAGAAAGAGGGATTATGCCGGACCCTGAGATTGATGCGTACATGAAGGCTACATCCATATCGGGTCAAAAAACTAATTTGGCAACAGATTATATTCTCAAGGTTCTTGGATTGGATATTTGTGCAGACACTATCATTGGTGATGCGATGACAAGGGGCATCTCTGGAGGACAAAGGAAGCGTGTCACAACAGGTGAGATGTTGGCATCACCAGCAAAGACACTCTTCATGGATGAAATCTCAACAGGATTGGACAGTTCCACCACTTTCCAGATATGCAAGTTCATGAGACAAATGGTTCATATCATGGATGTAACCACAGTGATTTCTCTTCTTCAGCCAGCACCAGAGACATTTGAACTCTTTGATGACATTATCCTACTTTCAGAAGGCCAAATTGTATACCAAGGTCCCCGTGAGAATGTGCTAGAGTTCTTCGAACACATGGGCTTCAAATGTCCTGAAAGAAAAGGAGTTGCTGATTTCTTACAAGAAGTAACATCAAAGAAAGATCAACAACAATACTGGTTTAAAACAAATGAACCTTACAGATATGTTTCAGTTACTGAATTTGCACGAGCCTTCGAATCCTTTCACATTGGAGAGCAACTTGTGGAAGACCTTCGAGTTCCTTATGATAAGAGCCAAACACACCCAGCTGCATTGGTGAAAGACAAGTATGGAATTTCAAACTGGGAACTCTTCAAGGCATGCTTTGCCAGAGAATGGCTTCTGATGAAACGCGACACGGGTCTCTACGTGTTCAGGATAGTACAACTAACTGTGGTGGGGGTTTTGGCCTTGAGTTTGTTCTTCAGAACTGAAATGCCAGTGGGCAATGTTGAAGATGGATACAAGTTCTTCGGAGCATTATTTTTTAGTATGACGAATATTATGTTTAATGGGGGGTATGAACAAGCCCTGACTGTTTCAAGACTTCCTGTCTTTTACAAACAGAGGGATTTCATGTTCTTCCCTGCATGGGCATATGCGTTGCCTTTATGGTTAACCAGGATCCCCGTGTCCTTAATGGATTCAGTATTATGGACTCTCCTTACATATTATACAATTGGATTTGCTCCCTCACCTAGCAGATTCTTCAAACATTTCCTGGCATTATTCAGCGTTCACAATATGGCAGTCGCTCTATTTCGGGCTATTGGTGCAATTGGTAGAACACAAGTTATTGCCAGTATACTAAGCAGTTTGACCTACCTAGTGGTATTTGTGCTAGGAGGATTCATTGTTGCCAAAAATGATATTAAGCCATGGATGATATGGGGAAATTACGTTTCTCCAATGACATACGGTCAGAATGCCATAGTCATAAATGAATTTTTAGATGAAAGATGGAGTCAACCAAATACAGACACTAGAATTGATGCACCTACAGTTGGAAAAGCACTTCTTAAATCTAGAGGCTTTTATACAGAAGAATATATGTTTTGGATATGCATTGGAGCTTTATATGGTTTTGCTCTTCTTTTCAACATTGTCGTCGTTATTGCATTGACTTTTTTGAATCCTATTGGGGATTCAAAAGCATACAGCAAGGAGGAAGATGCCAAGAAGAATGAAAAGTTAACCTCTAGACTGCATGGCACACAAGACATGGCAGTGAGAAATTCTTCAGGAATTGCTGGTTCTTCTAATCAAGAAAGAAGATTGGTTCTGCCGTTTCAACCTCTTTCACTCGCATTTAATCATGTGAACTACTATGTAGATATGCCTTCTGAAATGAAGAGTCAAGGAATCAATGAAGATCGACTTCAACTATTACATGATGTCAGTGGAGCTTTCAGACCAGGCGTGTTAACAGCACTTATGGGTGTTAGTGGTGCTGGGAAAACAACTCTCATGGATGTGTTAGCTGGAAGAAAAACAGGTGGTTACATTGAAGGAAGTATCAGCATCTCAGGTTACCCAAAGAACCAAGAAACGTTTTCTCGAGTCAGCGGTTATTGTGAACAGAATGACATTCATTCTCCACATGTCACTGTATATGAATCACTATTGTTTTCAGCATGGCTTCGCCTTCCTGCAGAAGTAAACCCGCAAACAAGAAAGAGATTTGTTGAAGAAGTTATGGAATTAATTGAGCTTAATCCAATTAGAGATGCAATTGTGGGGCTTCCAGGAGTAGATGGTTTATCAACAGAACAGAGGAAAAGACTTACTATTGCTGTAGAGCTGGTTGCCAACCCTTCAATCATCTTCATGGATGAACCAACTTCAGGTCTTGATGCTAGGGCTGCTGCTATTGTTATGCGCACTGTGAGAAACACAGTAAACACAGGGAGAACCGTTGTGTGCACAATTCACCAACCAAGCATAGACATTTTTGAATCTTTTGATGAGCTATTGTTGATGAAGAGAGGAGGACAAATTATCTATGCTGGACCTCTTGGTCGTTACTCACATGAGCTTATACAATATTTTGAAGGTATTGCAGGGGTTCCAAAAATAAAGCCTGCCTATAATCCTGCCACATGGATGCTTGAAATCAGCACTCCTTCAATTGAGTCTCAACTGGGCATAGATTTTGCTGAGATTTATTCTAACTCTCATCTTCATCAAAGGAATCAAGAGCTTATCAGAGAGCTCAGTAATCCAGCACCAGGTTCTGAGGACTTATTCTTCCCAACCAAATACTCCCAGCCATTTTTTGTGCAGTTGAAAGCTTGTTTCTGGAAACAATTTTTGTCCTACTGGAGAAATCCTCCGTATAATGTCACTCGAATCTTCTTCACACTAACCCTGGGATTAATGTTTGGTCTAATCTTCTTCAATAAAGCCAAAGACGTGCATAAACAACAAGATGTAGGTAATCTAGTGGGAGCCATGTACGCTTCTATGCTGTTCCTTGGATACATGAATGCTATGGGAGTACAGCCAGTTATTAACATGGAACGAATCGTCTTGTATCGCGAACACGCGGCTGGGATGTATTCTCCTTTGCCCTATGCAATTGGTCAGGTGATAATAGAGGTGATTTATACTTCAGTTCAAACGGCCATTTATACTATCGCCCTTTACTTCATGATTGGATTTGAATGGAAGGCAGGGCAGTTCTTCATGTTGTACTACTTCATGTTAACATGTTTTATCTACTTCACATTATACGGAATGATGGTTGTTGCCTTAACCCCGAATTTCCAAATTGCTACTGTTTTTCTTGGCTTCTTCTTGAACGTCTGGAGCTTGTTCTCTGGATTTGTCATTCCTAGGACGCAAATCCCTGTGTGGTGGAGATGGTACTATTGGGCTTCTCCTAATGCTTGGACGATCTATGGTCTTGTTGTCTCTCAATTGGGTGATGGAGATACACAGATAGAAGTTCCAGGAGCTGGAACCATGGGGCTTAAGGAGTTCCTCAAGAAAACCTTTGGTTTTGAGTACGACTTCCTTCCTGTGGTTGCTGCTGTTCAATTGGGCTGGGTTCTTCTTTTCTTGTTTGTGTTTGCATATGCCATGAAATTTCTGAACTTTCAGAAAAGATAG 4374 0.415 MASRFSWGEDMAIGGRNHLSLPSRSFSAGWSVPPSPANSLSSFSMRWREDNENDNDEELKWAAIERLPTYDRLRKGVLKIMHDNGKIVHCPIDVTHLGMQDKKILLDSILNIVEEDNEKFLRVLRSRIDRVEIKLPKIEVRYENLSVEGDVHVGRRALPTLLNFVLNALESAIGRFHLTPSNKTSVQILKDVSGIVKPSRMTLLLGPPGAGKTTLLLALAGKLDHDLRTHGRITYCGHELNEFIAQKTCAYISQHDLHYGEMTVRETLDFSGRCLGVGTRYEMLEELSRREKERGIMPDPEIDAYMKATSISGQKTNLATDYILKVLGLDICADTIIGDAMTRGISGGQRKRVTTGEMLASPAKTLFMDEISTGLDSSTTFQICKFMRQMVHIMDVTTVISLLQPAPETFELFDDIILLSEGQIVYQGPRENVLEFFEHMGFKCPERKGVADFLQEVTSKKDQQQYWFKTNEPYRYVSVTEFARAFESFHIGEQLVEDLRVPYDKSQTHPAALVKDKYGISNWELFKACFAREWLLMKRDTGLYVFRIVQLTVVGVLALSLFFRTEMPVGNVEDGYKFFGALFFSMTNIMFNGGYEQALTVSRLPVFYKQRDFMFFPAWAYALPLWLTRIPVSLMDSVLWTLLTYYTIGFAPSPSRFFKHFLALFSVHNMAVALFRAIGAIGRTQVIASILSSLTYLVVFVLGGFIVAKNDIKPWMIWGNYVSPMTYGQNAIVINEFLDERWSQPNTDTRIDAPTVGKALLKSRGFYTEEYMFWICIGALYGFALLFNIVVVIALTFLNPIGDSKAYSKEEDAKKNEKLTSRLHGTQDMAVRNSSGIAGSSNQERRLVLPFQPLSLAFNHVNYYVDMPSEMKSQGINEDRLQLLHDVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKNQETFSRVSGYCEQNDIHSPHVTVYESLLFSAWLRLPAEVNPQTRKRFVEEVMELIELNPIRDAIVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVNTGRTVVCTIHQPSIDIFESFDELLLMKRGGQIIYAGPLGRYSHELIQYFEGIAGVPKIKPAYNPATWMLEISTPSIESQLGIDFAEIYSNSHLHQRNQELIRELSNPAPGSEDLFFPTKYSQPFFVQLKACFWKQFLSYWRNPPYNVTRIFFTLTLGLMFGLIFFNKAKDVHKQQDVGNLVGAMYASMLFLGYMNAMGVQPVINMERIVLYREHAAGMYSPLPYAIGQVIIEVIYTSVQTAIYTIALYFMIGFEWKAGQFFMLYYFMLTCFIYFTLYGMMVVALTPNFQIATVFLGFFLNVWSLFSGFVIPRTQIPVWWRWYYWASPNAWTIYGLVVSQLGDGDTQIEVPGAGTMGLKEFLKKTFGFEYDFLPVVAAVQLGWVLLFLFVFAYAMKFLNFQKR* 1458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0729 1457 Pfam ABC transporter 884 1036 IPR003439 GO:0005524
Lja1g0729 1457 Pfam ABC-transporter N-terminal 114 164 IPR029481 -
Lja1g0729 1457 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 865 1108 IPR003439 GO:0005524
Lja1g0729 1457 Pfam ABC-2 type transporter 1182 1394 IPR013525 GO:0016020|GO:0140359
Lja1g0729 1457 Pfam ABC-2 type transporter 525 737 IPR013525 GO:0016020|GO:0140359
Lja1g0729 1457 Gene3D - 871 1103 IPR027417 -
Lja1g0729 1457 Pfam Plant PDR ABC transporter associated 742 806 IPR013581 -
Lja1g0729 1457 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 185 446 IPR027417 -
Lja1g0729 1457 PANTHER ABC TRANSPORTER G FAMILY MEMBER 34-RELATED 39 1457 - -
Lja1g0729 1457 CDD ABCG_PDR_domain2 853 1091 IPR034003 -
Lja1g0729 1457 CDD ABCG_PDR_domain1 178 428 IPR034001 -
Lja1g0729 1457 Pfam ABC transporter 189 371 IPR003439 GO:0005524
Lja1g0729 1457 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 173 446 IPR003439 GO:0005524
Lja1g0729 1457 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 879 1094 IPR027417 -
Lja1g0729 1457 Gene3D - 175 482 IPR027417 -
Lja1g0729 1457 PANTHER ATP-BINDING CASSETTE TRANSPORTER 39 1457 - -
Lja1g0729 1457 SMART AAA_5 198 423 IPR003593 -
Lja1g0729 1457 SMART AAA_5 893 1085 IPR003593 -
Lja1g0729 1457 Pfam ABC-2 type transporter 404 457 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0729 Lja-Chr1 7010129 7017856 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0729 K08711 - gmx:100790545 2195.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0729 1 7010129 7017856 Lja1g0729 1 7010129 7017856 ECH