Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0717 ATGGCTGCTCCAGTCAACAACTCTCACGGTGGCGTCAACGGTGTCATTGCAGAAGCTCACAAGCTCATTATCGATACCGACCCTGGGATCGATGATAGTATGGCAATTATGATGGCATTTCAAACTCCAGAGGTGGATGTCCTGGGTTTGACTTCCATTTTTGGTAATGCTGCTACGGAAGATGCCACGCGCAATGCTTTGCTTTTGTGTGAGATCGCAGGCCGTGAAGATGTTCCAGTTGCAGAGGGAAGCCATGAGCCGTTAAAGGGTGGAAGGCCACGTGTTGCTGATTTCGTTCATGGTAAAGATGGATTGGGGAACTTATTCCTACCTGATCCGAAAACTAAGAAAATTGAAAAAAGTGCAAGTGAGTTTTTAGTAGACAAGGTCTCTGAATTTCCTGGTGAAGTGACTGTACTAGCACTTGGACCCCTTACAAACGTAGCTTTAGCAGTCAAAAGAGATTCTTCTTTTGCAAGCAAGGTAAAGAGAATAGTTGTACTCGGCGGATCATTCTTTGCCCTGGGGAATGTCAATCCAGCTGCAGAAGCAAATATCTATGGAGACCCAGAAGCAGCAGATGTTGTATTTACGTCTGGAGCAAATATTGTTGTTGTAGGAATAAACATTACAACCCAAGTCACATTAACAGACGCTGATCTCCTTAAACTGAAGGAATCCAAAGGAAAGCATGCTTCTCTCTTGAGTGACATGTGCAAGTTCTATAGGGATTGGCATGTAAAATCTGACGGACTACATGGAATTTTCCTTCACGACCCTGTTAGTTTTGTGGCAGTTGTGCGTCCAGAACTTTTCACATACAAAAAGGGGGTTGTGCGAGTAGAGACACAGGGCATCTGTGTCGGGCATACACTTATGGACCAAGGATTAAAAAAATGGAATACAAGCAATCCATGGACAGATTATTCTCCTGTTTCAGTTGCTTGGACGGTGGATATTGAGGGAGTTCTTAATTATGTTAGGGAAGTATTGATGAAACCCTGA 1005 0.4388 MAAPVNNSHGGVNGVIAEAHKLIIDTDPGIDDSMAIMMAFQTPEVDVLGLTSIFGNAATEDATRNALLLCEIAGREDVPVAEGSHEPLKGGRPRVADFVHGKDGLGNLFLPDPKTKKIEKSASEFLVDKVSEFPGEVTVLALGPLTNVALAVKRDSSFASKVKRIVVLGGSFFALGNVNPAAEANIYGDPEAADVVFTSGANIVVVGINITTQVTLTDADLLKLKESKGKHASLLSDMCKFYRDWHVKSDGLHGIFLHDPVSFVAVVRPELFTYKKGVVRVETQGICVGHTLMDQGLKKWNTSNPWTDYSPVSVAWTVDIEGVLNYVREVLMKP* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0717 334 Gene3D - 12 334 IPR036452 GO:0016799
Lja1g0717 334 SUPERFAMILY Nucleoside hydrolase 19 331 IPR036452 GO:0016799
Lja1g0717 334 PANTHER INOSINE-URIDINE PREFERRING NUCLEOSIDE HYDROLASE 16 334 IPR023186 -
Lja1g0717 334 CDD nuc_hydro_CaPnhB 21 332 - -
Lja1g0717 334 Pfam Inosine-uridine preferring nucleoside hydrolase 22 323 IPR001910 GO:0016799
Lja1g0717 334 PANTHER URIDINE NUCLEOSIDASE 1 16 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0717 Lja-Chr1 6878183 6881999 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0717 K01240 - gmx:100818908 566.614