Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0713 ATGGAGATGGTGAAAGGAATGCCGGTGCTTGGCCTCGTTCTTTTGCTAATTATCGGGCTTGACGGTGTTTGTTGCGGCTACACTCGCCCACCGCCGCGGAAAACCATCTACGTGGCTGATACTGATGACTCAGATTCGCCACAACAGGTACACATATCCCAAGTGGGCCAAGATAAGATGAGGATATCATGGATCACAAACAGCCCAACCACTCCAAAAATTGAGTACGGCCCAACTACTTCACCAAACACCTTCTCTGCCACTGGGACCACCTCTTCCTACCACTATACTCTCTACCAGTCAGGTGAAATCCACGAGGTCGTAATTGGGCCCCTCAAGCCCAACACGGTCTACTACTATCGTTTGGGTGACCCACCTTCAGCCCAATCATACAATTTCAAAACTACACCCTCCCAATTTCCCATCAAGTTTGCAGTAGTTGGGGATCTCGGACAGACAGAGTGGACTCAGTTGACACTAGATCATATAGGCAAATCGAATTATGACATGTTGTTGCTACCGGGTGACTTGTCCTACGCGGACTTTATCCAAACTCGATGGGACTCATTTGGTCGTTTAGTTGAGCCATTAGCGAGCCAGCGTCCGTGGATGGTGACCCAAGGCAACCACGAGGTTGAGAAGATACCGATCATCCACCGGACGCCATTCACAGCTTACAATGCTCGGTGGCGAATGCCGTTCGAAGAGAGTGGATCAGACTCAAACCTCTACTACTCCTTTGATGTGGCTGGTGTTCATGTTATCATGTTGGGTTCCTACACTGATTTTGACCCTGGTTCTTCGCAATACGAGTGGCTTCAAGGGGATTTGGGGAAGATAAACAGAGGGAAAACTCCTTGGGTGATGGTGCTCCTTCATGCTCCGTGGTACAATTCAAACACTGCTCATCAGGGTGAGAGTGAATCTGAGGACATGAAGGAAGCCATGGAAGATTTGCTCTATCATGCCCGTGTTGATGTTGTTTTTACAGGACATGTTCATGCCTATGAACGCTTTACACGAGTTTATAAAGACAAGGCTGACAATTGTGGTCCAGTACATATCACCATTGGGGATGGGGGTAACCGTGAAGGCCTCGCCACTAAGTACATAGACCCGAAGCCAGAGATATCAATATTCAGGGAAGCTAGCTTTGGACATGGGATGTTGGAGGTGGTTAATGCATCATCTGCTCTTTGGAGTTGGCATAAGAATGATAATGATGAACCGGTTCTTAGTGACTCTCTCTGGCTTACAAGCCTCTCCTCTAATCCTGCTTGTAAAGTGTAA 1290 0.4798 MEMVKGMPVLGLVLLLIIGLDGVCCGYTRPPPRKTIYVADTDDSDSPQQVHISQVGQDKMRISWITNSPTTPKIEYGPTTSPNTFSATGTTSSYHYTLYQSGEIHEVVIGPLKPNTVYYYRLGDPPSAQSYNFKTTPSQFPIKFAVVGDLGQTEWTQLTLDHIGKSNYDMLLLPGDLSYADFIQTRWDSFGRLVEPLASQRPWMVTQGNHEVEKIPIIHRTPFTAYNARWRMPFEESGSDSNLYYSFDVAGVHVIMLGSYTDFDPGSSQYEWLQGDLGKINRGKTPWVMVLLHAPWYNSNTAHQGESESEDMKEAMEDLLYHARVDVVFTGHVHAYERFTRVYKDKADNCGPVHITIGDGGNREGLATKYIDPKPEISIFREASFGHGMLEVVNASSALWSWHKNDNDEPVLSDSLWLTSLSSNPACKV* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0713 429 CDD MPP_PAPs 138 420 IPR041792 -
Lja1g0713 429 Pfam Calcineurin-like phosphoesterase 143 336 IPR004843 GO:0016787
Lja1g0713 429 Pfam Purple acid Phosphatase, N-terminal domain 47 135 IPR015914 GO:0003993|GO:0046872
Lja1g0713 429 PANTHER ACID PHOSPHATASE RELATED 14 427 IPR039331 GO:0003993
Lja1g0713 429 SUPERFAMILY Purple acid phosphatase, N-terminal domain 30 137 IPR008963 GO:0003993|GO:0046872
Lja1g0713 429 SUPERFAMILY Metallo-dependent phosphatases 141 411 IPR029052 -
Lja1g0713 429 Gene3D - 46 138 - -
Lja1g0713 429 Gene3D - 139 427 IPR029052 -
Lja1g0713 429 Pfam Iron/zinc purple acid phosphatase-like protein C 351 408 IPR025733 -
Lja1g0713 429 PANTHER PURPLE ACID PHOSPHATASE 14 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0713 Lja-Chr1 6848341 6851547 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0713 45 409 Miscellaneous Gene Families AT2G03450 26.897 2.12e-32 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0713 K22390 - gmx:100794764 682.559
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0713 1 6848341 6851547 Lja1g0713 1 6848341 6851547 ECH