Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0708 ATGGCTTCAAAGGCGATGGCCATGGCAGCGGAGAAGATAGGCACGGCGGCGCGACGCCAAGCCGTCACGTTAACCGACACCGCCGCGTCGCGAATACGGCAGTTGCTAGAGAAGCGCCAGAGGTCCTTCTTGAAGCTCGGTGTCAAGGCTCGCGGTTGCAACGGCTTATCCTACACCCTCAATTACGCAGATGAAAAAGGGAAATTTGATGAGTTGGTTGAAGATAAAGGTGTTAAGATATTGATTGATCCAAAGGCTTTGATGCATGTCATTGGAACTAAAATGGATTTTGTAGATGACAAACTGAGATCTGAGTTTATTTTTGTCAATCCAAACTCTAAAGGTCAGTGTGGTTGTGGTGAATCTTTCATGACAACACCCAGTAGTGGAGCTTCTAAGCAGTGA 405 0.4741 MASKAMAMAAEKIGTAARRQAVTLTDTAASRIRQLLEKRQRSFLKLGVKARGCNGLSYTLNYADEKGKFDELVEDKGVKILIDPKALMHVIGTKMDFVDDKLRSEFIFVNPNSKGQCGCGESFMTTPSSGASKQ* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0708 134 PANTHER IRON-SULFUR ASSEMBLY PROTEIN ISCA-LIKE 3, MITOCHONDRIAL 3 133 - -
Lja1g0708 134 ProSitePatterns Hypothetical hesB/yadR/yfhF family signature. 106 123 IPR017870 -
Lja1g0708 134 PANTHER IRON-SULFUR CLUSTER ASSEMBLY PROTEIN 3 133 - -
Lja1g0708 134 SUPERFAMILY HesB-like domain 21 114 IPR035903 -
Lja1g0708 134 Pfam Iron-sulphur cluster biosynthesis 22 121 IPR000361 -
Lja1g0708 134 Gene3D - 21 126 IPR035903 -
Lja1g0708 134 TIGRFAM TIGR00049: iron-sulfur cluster assembly accessory protein 22 124 IPR016092 GO:0016226|GO:0051536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0708 K22063 - gmx:100792861 241.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0708 1 6798087 6801371 Lja1g0708 1 6798087 6801371 ECH