Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0702 ATGCTTCCTCTCTGCAACGCTTCTCTGAGTTCACAATCGAGCATCAGAACTTCCATTCCTGGAAGACCTAACATCGCTATCACCAACTCCGCGTCTTCCAGCGAGAGAATCAGCAACCGGAGAAGAACCATGTCTGCCGTTGAAGCTCGAAGCTCACTCATTCTCGCCCTTGCTTCCCAAGCCAACTCTCTCACCCAGCGACTTGTAGTGGACGTTGCTACTGAGACCGCAAGATACTTGTTCCCGAAGAGACTTGAAAGCCGCACCCTCGAGGAGGCGTTGATGGCAGTTCCGGACCTTGAGACTGTCAAGTTCAAAGTTCTTAGTAGAAGGGACAATTATGAGATCAGGGAAGTTGAGCCTTACTTTGTAGCGGAGGCTACAATGCCTGGGAAGAGTGGGTTTGACTTCAGTGGGGCTTCTCAGTCCTTTAATGTCCTAGCTGAGTACCTTTTTGGTAAGAATACATTGAAGGAGAAAATGGAGATGACTACACCTGTTTATACAAGTAAGAATCAATCTGATGGGGTTAAAATGGATATGACAACTCCAGTGTATACAGCAAAGATGGAAGATCAAGATAAGTGGACAATGTCTTTCATCTTGCCGTCAAAGTATGGTGCTAACTTGCCACTGCCGAAAGATTCCTCTGTGAGGATTAAAGAGATTCCCAGAAAAATAGTTGCTGTAGTTTCCTTCTCAGGTTTTGTGAATGATGAAGAAGTTAAACAGCGAGAACTGAAACTCAGGGAAGCCTTGAAAAGTGATGGACAGTTTAAAATTAAAAAGGGAACTTCAGTAGAAGTTGCACAGTATAATCCACCGTTTACTCTTCCATTTCAACGCCGTAACGAGATTGCTTTGGAGGTGGAACGGAAAGATTATTAG 888 0.4471 MLPLCNASLSSQSSIRTSIPGRPNIAITNSASSSERISNRRRTMSAVEARSSLILALASQANSLTQRLVVDVATETARYLFPKRLESRTLEEALMAVPDLETVKFKVLSRRDNYEIREVEPYFVAEATMPGKSGFDFSGASQSFNVLAEYLFGKNTLKEKMEMTTPVYTSKNQSDGVKMDMTTPVYTAKMEDQDKWTMSFILPSKYGANLPLPKDSSVRIKEIPRKIVAVVSFSGFVNDEEVKQRELKLREALKSDGQFKIKKGTSVEVAQYNPPFTLPFQRRNEIALEVERKDY* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0702 295 Pfam SOUL heme-binding protein 169 288 IPR006917 -
Lja1g0702 295 Gene3D Regulatory factor, effector binding domain 173 295 IPR011256 -
Lja1g0702 295 Gene3D Regulatory factor, effector binding domain 99 172 IPR011256 -
Lja1g0702 295 SUPERFAMILY Probable bacterial effector-binding domain 95 170 IPR011256 -
Lja1g0702 295 PANTHER HEME-BINDING PROTEIN-RELATED 30 294 IPR006917 -
Lja1g0702 295 PANTHER OS02G0533200 PROTEIN 30 294 - -
Lja1g0702 295 SUPERFAMILY Probable bacterial effector-binding domain 168 290 IPR011256 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0702 Lja-Chr1 6767067 6770626 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0702 - - ccaj:109796809 462.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0702 1 6767067 6770626 Lja1g0702 1 6767067 6770626 ECH