Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0700 ATGGGCTGCGTCTCCTCTAAACTCATCAGGAAAGACATCAAGCAAGAGCATGTCATCATCGACAATTGCGGTGGCGGCGGCCGTTACTTAAGCCATGTGGTTTCTCTAACTTCCTCTACCTATGGAGCACTCAAGTTGGACAAGGACAATGACCAACCAGTCATTGCTGCAAAGCCACGCGAAGAACCAGAAGCTATCACCACCATCAACGCTTGGGAACTCATGGAGGGTCTTGAAGATGGAGTGCCCATTTCAAATCAGCCTAAGAAAAGTCCAAAGTCTTCTTCACCTTTTCTTCGTGGGTTCATGAACTCAGACACCAGGAGCCCCTTGAAGTTCTTGAATCAACTGGGGTCCCCCAAGACCGTGAAGAAGTCCACTGGGAAGGAGAACAAGGTTCAAGTCAATGGAGTCAGAACTGGTGGTGTGAGACGCTTGGATTATAGTAATAGTCCCAAGGGAATTCTCAAACCAAGCAATTTGTCACCCAATGCAAGTAAGAATTCGGGTATTCCAGCGAAAGGGTCTCCGATTTGTGCCAGAAGAAAGAGTTTTGGTGGGAATGAGAAAGACACTCTGCAATGTTCCTCGCGGAGGAAGAGTCAGAGTCCTCTGTTTGATCCAGAGCTTGTTGCATCATATGAAAAGGAACTCTCTGAAGAGGAAGAACAGGTCAAGAGAATGGTTTGGGCTACTCCAAAAACCAGAAGAGCAAGGAAATCGCTGGATTCACTGTCCTTAATTCAGATGTTTGAGAAAAAATGTCCACCGGGAGGGGAAAATTCTGTGGTGATTTACACTACAACTTTGCGAGGAATCAGGAAGACTTTCGAGGATTGCAACAAAGTGAGGGCAATCATTGAATCTTACTGTGTGCAAATGCGTGAGCGTGATGTGTCAATGGATTCAGGGTTTAAGGAGGAGTTGAGGAAGCTGATGGGGGCGGAGCAAGTGAAAGTTCCGGTTGTTTTTGTGAAGGGAAGGTTGGTTGGAGGAGTTGATGAAGTTGTGAAGTTGGAAGATGAAGAGAAATTGGGGGTTCTGTTGGAGGGGATTCCAAAGGCAGTGGGTGGGTGTGAAGGTTGTGGTGGTGTGAGGTTTGTGATGTGTGTGGAATGTAATGGAAGTTGCAAGGTTTTGGATGAGGATAAGAAGAAGACAGTCAAGTGTGGGAAGTGTAATGAGAATGGAATCATGCAATGTCCTATCTGTTGTTGA 1218 0.4631 MGCVSSKLIRKDIKQEHVIIDNCGGGGRYLSHVVSLTSSTYGALKLDKDNDQPVIAAKPREEPEAITTINAWELMEGLEDGVPISNQPKKSPKSSSPFLRGFMNSDTRSPLKFLNQLGSPKTVKKSTGKENKVQVNGVRTGGVRRLDYSNSPKGILKPSNLSPNASKNSGIPAKGSPICARRKSFGGNEKDTLQCSSRRKSQSPLFDPELVASYEKELSEEEEQVKRMVWATPKTRRARKSLDSLSLIQMFEKKCPPGGENSVVIYTTTLRGIRKTFEDCNKVRAIIESYCVQMRERDVSMDSGFKEELRKLMGAEQVKVPVVFVKGRLVGGVDEVVKLEDEEKLGVLLEGIPKAVGGCEGCGGVRFVMCVECNGSCKVLDEDKKKTVKCGKCNENGIMQCPICC* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0700 405 MobiDBLite consensus disorder prediction 81 201 - -
Lja1g0700 405 PANTHER GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN CG12206-RELATED 1 405 - -
Lja1g0700 405 Gene3D Glutaredoxin 256 351 - -
Lja1g0700 405 PANTHER EMB|CAB85507.1 1 405 - -
Lja1g0700 405 MobiDBLite consensus disorder prediction 153 171 - -
Lja1g0700 405 SUPERFAMILY Thioredoxin-like 256 350 IPR036249 -
Lja1g0700 405 Pfam Glutaredoxin 263 330 IPR002109 -
Lja1g0700 405 Coils Coil 211 231 - -
Lja1g0700 405 ProSiteProfiles Glutaredoxin domain profile. 251 356 - -
Lja1g0700 405 MobiDBLite consensus disorder prediction 87 134 - -
Lja1g0700 405 CDD GRX_GRX_like 262 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0700 Lja-Chr1 6754151 6755421 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0700 K17479 - gmx:121174128 503.827