Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0695 ATGACAGAAGTGTTGCAGTTACCTTCACCTTCACGACGTTGTTCCAATGATGGGTCGCACCAAACTGCGCTTATTAACAACAGTTCCTCAGTGGAAGAAGGGGTGTTGCAGTTGCAGACCCATTTGGATTTGGTTGAAGAAGACGAAGAGGAAGAGAAAGAAAAGGACAGGGAAGGAGATCAGCTTTCTCTTTTGACCCTTTTGATTGCGACGTTTCGGAAATCGTTGATTGGTAGTTGCAGCACCAGTCCTAGAGATAGTGGTGCCCTTTCTTCTTCTTCAATGGAGATTGGTTGGCCTTCCAATGTGAGGCATGTGGCTCATGTTACCTTCGACCGCTTCCATGGCTTTCTTGGTTTGCCTGTTGAATTTGAACCTGAAGTTCCCAGGAGACCACCCAGCGCAAGCACAAGCGTTTTTGGGGTTTCAACAGAATCTATGCAGCTTTCTTTTGATGCCAGAGGAAATAGTGTACCTACAATATTGCTGTTAATGCAAAGACATTTGTATGCGCGAGGAGGCCTCCAGGCTGAAGGAATATTCAGAATTAATGCTGAAAATAGTCAAGAGGAGCTTGTGAGGGAACAATTAAACAGAGGAGTTGTACCGAATGGCGTTGATGTGCACTGCTTGGCAGGTCTTATAAAGGCTTGGTTTAGAGAACTCCCAACTGGAATATTGGACCCTCTTTCACCAGAGGAGGTGATGCAGTCCCAGTCAGAAGAAGAATGTGACCAGCTTGTGAGGCTTCTTCCTCCAACAGAAGCTGCTCTGCTAGATTGGGCCATAAACCTAATGGCAGATGTTGCTCAAATGGAACATTTTAACAAGATGAATGCGCGTAATATTGCAATGGTTTTTGCACCAAACATGACTCATATGGCCGATCCTTTGACTGCTTTGATGTATGCAGTACAAGTCATGAGTTTTCTCAAGACTCTTGTCGTTAAGACACTGAGAGAAAGAGAGGAGTCCATTGTAAAATCCAATCCCGTTCCAAACCTGAATTCTTTTGATGATGACGGGCACCAGAGCGATTCACAAGTGCTCCCCAAGGATGGCAGTGAAAATGGAAATGATTGTAGTGATGAGGATACAGTATTTGTCTCTGCAGAACCATCTCAACCAAGCCCTACCCATCATACTGAAGATGGCTGTGAAACTGAAAGTGGATCCGAAACTTCGCCAACGCCTGCTGAAAATTTTCTCTCTAGTGGAAGTAGGTTGTTGATTGATAGTTGTCCTTGCAATGTTGTCTCCCAACTTTGCTCGTTTGCAATTGGACTTCAAGACTCTAGCATTGCTACTGGTCAAGCAAAAATTAGCAGGAGCAAAAGCCTTCAAATGAGTACTTCTGATATAGACAAGAGTTTCAAGAACGTGATCGAGTTTCCAGTAGTAGGGCCTGCAGAGAAGAACAGGGGAACTGCGATCATTGGGCGTATAAATTCAAGAACAGAGTTGACTGAAGCTTGGCGTTGA 1482 0.446 MTEVLQLPSPSRRCSNDGSHQTALINNSSSVEEGVLQLQTHLDLVEEDEEEEKEKDREGDQLSLLTLLIATFRKSLIGSCSTSPRDSGALSSSSMEIGWPSNVRHVAHVTFDRFHGFLGLPVEFEPEVPRRPPSASTSVFGVSTESMQLSFDARGNSVPTILLLMQRHLYARGGLQAEGIFRINAENSQEELVREQLNRGVVPNGVDVHCLAGLIKAWFRELPTGILDPLSPEEVMQSQSEEECDQLVRLLPPTEAALLDWAINLMADVAQMEHFNKMNARNIAMVFAPNMTHMADPLTALMYAVQVMSFLKTLVVKTLREREESIVKSNPVPNLNSFDDDGHQSDSQVLPKDGSENGNDCSDEDTVFVSAEPSQPSPTHHTEDGCETESGSETSPTPAENFLSSGSRLLIDSCPCNVVSQLCSFAIGLQDSSIATGQAKISRSKSLQMSTSDIDKSFKNVIEFPVVGPAEKNRGTAIIGRINSRTELTEAWR* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0695 493 CDD RhoGAP 159 311 - -
Lja1g0695 493 SMART RhoGAP_3 156 319 IPR000198 GO:0007165
Lja1g0695 493 Pfam RhoGAP domain 159 293 IPR000198 GO:0007165
Lja1g0695 493 MobiDBLite consensus disorder prediction 327 401 - -
Lja1g0695 493 MobiDBLite consensus disorder prediction 329 381 - -
Lja1g0695 493 CDD CRIB 95 135 - -
Lja1g0695 493 ProSiteProfiles CRIB domain profile. 97 110 IPR000095 -
Lja1g0695 493 SUPERFAMILY GTPase activation domain, GAP 136 315 IPR008936 GO:0007165
Lja1g0695 493 Pfam P21-Rho-binding domain 96 122 IPR000095 -
Lja1g0695 493 Gene3D CRIB domain 91 125 IPR036936 -
Lja1g0695 493 PANTHER RHO GTPASE-ACTIVATING PROTEIN 1 1 493 - -
Lja1g0695 493 MobiDBLite consensus disorder prediction 1 21 - -
Lja1g0695 493 SMART PBD_5 97 131 IPR000095 -
Lja1g0695 493 PANTHER MKIAA1688 PROTEIN 1 493 IPR044785 GO:0005096
Lja1g0695 493 Gene3D Rho GTPase activation protein 126 332 IPR008936 GO:0007165
Lja1g0695 493 ProSiteProfiles Rho GTPase-activating proteins domain profile. 142 327 IPR000198 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0695 Lja-Chr1 6714342 6718581 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0695 - - gmx:121172725 734.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0695 1 6714342 6718581 Lja1g0695 1 6714342 6718581 ECH