Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0694 ATGAGCAGGTCAGGACAGCCACCAGATTTGAAGAAGTACATGGACAAGAATCTTCAAATTAAGCTGAATGCAAATCGCATGATTGTTGGCACCCTCCGCGGTTATGATCAATTTATGAATATGGTTGTTGACAATACTGTAGAAGTGAATGGCAATGAGAAAAATGACATAGGGATGGTGGTAATCAGAGGAAATAGTGTGGTCACTGTTGAGGCACTTGAACCCGTGACCAGAACCTCCTGA 243 0.428 MSRSGQPPDLKKYMDKNLQIKLNANRMIVGTLRGYDQFMNMVVDNTVEVNGNEKNDIGMVVIRGNSVVTVEALEPVTRTS* 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0694 80 SUPERFAMILY Sm-like ribonucleoproteins 8 76 IPR010920 -
Lja1g0694 80 Pfam LSM domain 9 71 IPR001163 -
Lja1g0694 80 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN 1 79 IPR044641 -
Lja1g0694 80 CDD Sm_G 6 74 IPR034098 GO:0000387|GO:0005681
Lja1g0694 80 Gene3D - 1 76 - -
Lja1g0694 80 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN G 1 79 - -
Lja1g0694 80 PIRSF Lsm7 5 79 - -
Lja1g0694 80 SMART Sm3 8 72 IPR001163 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0694 Lja-Chr1 6707673 6711096 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0694 K11099 - gmx:100305530 151.754
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0694 1 6707673 6711096 Lja1g0694 1 6707673 6711096 ECH