Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0673 ATGTCTCAGAAGAAATTGACGCCGAATCTGGATCGCCAAAGCACCAAGGTGCTCAATCTCACGGTGCTCCGGCGAATGGATCCGTTCATCGACGAGATCCTCTTCACCGCCGCACATGTCTCTCTGTACGACTTCAACATCGAAAGCAACCAGTGGAGTCGCAAGAATGTTGAAGGATCTCTCTTCGTTGTCCAAAGGAACCCGCAAGTGAAACCAGAGTTTCAGTTTATCGTCATGAATCGAAGAAATACAGATAACCTAAAGGAGAACCTATTGGATTTTGAGTACGAACTTAAAAAACCATACTTGTTATATAGGAATGCAAAGCAAGAAGTTAATGGTATATGGTTTTACAACCCAGATGAATGTGAAGAAGTTGGAAATCTCTTTAATAGGATAATTGATGAATACCCAAAGGCACCTCCAAGTACAATAATGCCTTCTAGCAATAGTGAGTTTGAGGAGCTTGAGCCAGTGTCAATTATAAGAGAAAGCCTCCTAGAGTCATCGTCAGCTGCTGCTTCTGCAAATACTCCTGAAGATTATGTTTTCATTAACTCCTTGAACGCATCCAAGGTTACTGGAAATTATGCTTCGAGTGTAGAAAGTTTTGGACGGCCCTACCATTCTGCAACTGTCACTTCTACTGTCCCCAATGGTTTATTCACTCCTGCACCTTCTGTACAAATACCATCTGCCTCTCATTTAGCTTCATCTGCCTCTCTTGAAACAATCAACATTGGCAATCAAGTCACTAAACTTGTTAACCCTTCTACTTTTCTTGCATCCAACTCTTCATCTTCACTGATAAGTTCTCGTATACTTTCGTCTGTGCCACCTAATGCAGCTGTTCATCATCCCCTGATACTGCCAAACCAATACGGCACTCCAGTTTTTCAACACTTTCCACCACCTAATCCTCCTCTATCTCTTAACCCTATCCCTAGTCCCACACCTAATAGACCTGTTATCAGCAGAGATAAAGTCCGTGATGCACTTCTATCACTGGTTCAGGATGATCAATTCATTGACATGGTGTTCCAAAAGTTACTGAAGGTGAATCTTTCGTGA 1071 0.423 MSQKKLTPNLDRQSTKVLNLTVLRRMDPFIDEILFTAAHVSLYDFNIESNQWSRKNVEGSLFVVQRNPQVKPEFQFIVMNRRNTDNLKENLLDFEYELKKPYLLYRNAKQEVNGIWFYNPDECEEVGNLFNRIIDEYPKAPPSTIMPSSNSEFEELEPVSIIRESLLESSSAAASANTPEDYVFINSLNASKVTGNYASSVESFGRPYHSATVTSTVPNGLFTPAPSVQIPSASHLASSASLETINIGNQVTKLVNPSTFLASNSSSSLISSRILSSVPPNAAVHHPLILPNQYGTPVFQHFPPPNPPLSLNPIPSPTPNRPVISRDKVRDALLSLVQDDQFIDMVFQKLLKVNLS* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0673 356 PANTHER MRNA-DECAPPING ENZYME-LIKE PROTEIN ISOFORM X1 1 352 - -
Lja1g0673 356 CDD EVH1-like_Dcp1 18 134 - -
Lja1g0673 356 Gene3D - 6 137 IPR011993 -
Lja1g0673 356 Pfam Dcp1-like decapping family 16 131 IPR010334 GO:0000290|GO:0008047|GO:0043085
Lja1g0673 356 SUPERFAMILY PH domain-like 18 139 - -
Lja1g0673 356 PANTHER TRANSCRIPTION FACTOR SMIF DECAPPING ENZYME DCP1 1 352 IPR010334 GO:0000290|GO:0008047|GO:0043085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0673 Lja-Chr1 6312093 6318208 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0673 K12611 - gmx:100786833 451.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0673 1 6312093 6318208 Lja1g0673 1 6312093 6318208 ECH