Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0664 ATGGGCAATTCTCAGTCACCTCAAAGCGATCCTCAATACGTTTCTGCATCCAGAGCTTTTACTCAAAAGGGACTACAAGACTTGAAGTCTCTGTTCAATTCTCTCGCATCTCAATCCCAAAGCAATGGAGAACACGTTTCTCCCTCTGTTTTTCAGTCATATTTTAGACTCAATGGTCCTGTTGGGGAGAGGATGTTTGATTTAGTTACTCAGGAGCGTAAGGATCAAAGGTTAACCTTTGAAGACCTCGTTGTTGCTAAAGCTACTTATGAGAAAGGAACGAAAGACGAAATTGACGAATTCATCTTTCGCTTATTAGATGTATCTGGTGATAATTTTGTGGGGAGGTCTGATTTGGAATCTGTTATGATTGCCATATTCAATGATATATTATGCATAAATAATTCTGAAGAAAGATCAAGTTCAAATCAGGATGTTGTCAACATATTTCTGAATGCTGCAAATTTCTCTGTGCATGAAGGGTGTACTGAGGAGACTATGTCTTTTGAAGATTTCAGAAATTGGTGTACTCATCTCCCGTCTGTGAGGAAGCTTCTTGGTAGCTTACTTTTGCCACCTGATTCAGGACGACCAGGTTCTCAAATTCCTAAACTATTGACCTCAAAAGGTGTTGATTCGAACATTACACTTTTAAGAGAGGAATATGCTTGGCACATAGGAGGAGCACTTTCTCAGCAAGAGTTGGAAGATTGGAAGATTTTGTATCATAGTGCTGTTAATGGTCTTAGTTTTAATACATTCTTGGGCAACATTTCAAGTCATGAAGGTCCGACCGTATTAATTATCAAGGACACAGAGGGTTATATATATGGAGGATATGCTTCTCAACCATGGGAGCGACATGCTGAGTTTTACGGAGACATGAAATCTTACCTTTTTCAACTATATCCAAAGGCATCTATATTCAGGCCTACCGGAGCAAACAATAATCTACAATGGTGCGCGGCCAACTTCAGTTCAGAGGACATTCCAAATGGCATTGGTTTTGGGGGACGAGTGCATCATTTTGGTTTGTTTATCTCAGCAAACTTCGATCAAGGACACACATTTTCATGTTCTACATTTGGTAGCCCTTGCCTCACCAAGACAAACCGTATATTGCCAGAAGTAATAGAGTGCTGGGGAGTGACTCAAGGTGCGGTACAAGGCAAGAATGATGCGGTGAAGGGCACTATACTTGAGAGGTTTAAGGAAGATCGAAACATGCTCAATATGGTAGGCCTAGCAAATTCCAGCGAGTAA 1263 0.407 MGNSQSPQSDPQYVSASRAFTQKGLQDLKSLFNSLASQSQSNGEHVSPSVFQSYFRLNGPVGERMFDLVTQERKDQRLTFEDLVVAKATYEKGTKDEIDEFIFRLLDVSGDNFVGRSDLESVMIAIFNDILCINNSEERSSSNQDVVNIFLNAANFSVHEGCTEETMSFEDFRNWCTHLPSVRKLLGSLLLPPDSGRPGSQIPKLLTSKGVDSNITLLREEYAWHIGGALSQQELEDWKILYHSAVNGLSFNTFLGNISSHEGPTVLIIKDTEGYIYGGYASQPWERHAEFYGDMKSYLFQLYPKASIFRPTGANNNLQWCAANFSSEDIPNGIGFGGRVHHFGLFISANFDQGHTFSCSTFGSPCLTKTNRILPEVIECWGVTQGAVQGKNDAVKGTILERFKEDRNMLNMVGLANSSE* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0664 420 ProSitePatterns EF-hand calcium-binding domain. 107 119 IPR018247 -
Lja1g0664 420 ProSiteProfiles TLDc domain profile. 216 384 IPR006571 -
Lja1g0664 420 Gene3D - 1 188 - -
Lja1g0664 420 ProSiteProfiles EF-hand calcium-binding domain profile. 94 129 IPR002048 GO:0005509
Lja1g0664 420 SUPERFAMILY EF-hand 1 193 IPR011992 -
Lja1g0664 420 PANTHER NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED 1 412 - -
Lja1g0664 420 PANTHER CALCIUM-BINDING EF-HAND FAMILY PROTEIN-RELATED 1 412 - -
Lja1g0664 420 SMART 109ultra 215 384 IPR006571 -
Lja1g0664 420 Pfam TLD 241 383 IPR006571 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0664 102 419 EF-hand Containing Proteins AT5G06260 59.813 2.29e-147 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0664 - - gmx:100804508 711.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0664 1 6210515 6217408 Lja1g0664 1 6210515 6217408 ECH