Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0656 ATGGCTTGTTCTGCTCCCTCTGCTTCTCTTCTCTCTTCAAACCCTAAAATCCTCTTCACTTCCAAATCCTCTTCTTCTTCTTCTGCTCCTCTCTCCTTCCCCAATTTCTCCAACTCTCTCTGCAAACCATTGCGCACTTCCCTCCATCCCTCCATTTCCTTCAACCGCTCCTCTCGTTCTCCCAGAAGCTTCGTTGTTAGGGCCTCTAGTGAACTTCCATTAGTTGGGAATAAAGCGCCGGATTTTGAAGCAGAGGCTGTTTTTGATCAGGAGTTTATCAAGGTCAAGCTATCTGAATACATTGGGAAGAAATATGTTATCCTCTTTTTCTACCCATTGGACTTCACATTTGTTTGTCCAACAGAAATCACTGCTTTCAGTGACCGGCATGCAGAATTTGAGGAAATAAATACAGAGATATTGGGTGTTTCCGTTGACAGTGTGTTCTCGCACCTTGCATGGGTTCAAACAGAAAGAAAGTCAGGGGGTCTTGGTGACTTGAATTATCCTTTAGTTTCTGATGTCACCAAATCTATATCAAAATCTTATGGTGTTCTTATTCCTGACCAGGGGATTGCATTGAGAGGATTGTTCATTATTGACAAGGAAGGGGTTATCCAGCACTCTACCATTAACAACCTTGGAATTGGTAGAAGTGTTGATGAGACCAAGAGAACACTCCAGGCCTTGCAGTATGTGCAGGAGAACCCAGATGAAGTTTGTCCTGCTGGGTGGAAGCCTGGTGAGAAGTCCATGAAGCCAGACCCTAAACTTAGCAAAGATTACTTTGCTGCGGTGTAG 801 0.4419 MACSAPSASLLSSNPKILFTSKSSSSSSAPLSFPNFSNSLCKPLRTSLHPSISFNRSSRSPRSFVVRASSELPLVGNKAPDFEAEAVFDQEFIKVKLSEYIGKKYVILFFYPLDFTFVCPTEITAFSDRHAEFEEINTEILGVSVDSVFSHLAWVQTERKSGGLGDLNYPLVSDVTKSISKSYGVLIPDQGIALRGLFIIDKEGVIQHSTINNLGIGRSVDETKRTLQALQYVQENPDEVCPAGWKPGEKSMKPDPKLSKDYFAAV* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0656 266 SUPERFAMILY Thioredoxin-like 73 264 IPR036249 -
Lja1g0656 266 Gene3D Glutaredoxin 67 266 - -
Lja1g0656 266 PANTHER THIOREDOXIN PEROXIDASE 36 266 - -
Lja1g0656 266 CDD PRX_Typ2cys 75 248 - -
Lja1g0656 266 Pfam C-terminal domain of 1-Cys peroxiredoxin 229 263 IPR019479 GO:0051920
Lja1g0656 266 Pfam AhpC/TSA family 75 208 IPR000866 GO:0016209|GO:0016491
Lja1g0656 266 ProSiteProfiles Thioredoxin domain profile. 73 232 IPR013766 -
Lja1g0656 266 PANTHER 1-CYS PEROXIREDOXIN PER1 36 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0656 Lja-Chr1 6106183 6108961 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0656 K03386 - jre:108985296 407.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0656 1 6106183 6108961 Lja1g0656 1 6106183 6108961 ECH