Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0639 ATGGCCTCCCAGCGTCAACCACCGTCGAGCTCCAACGCGTTTTCCTTCCTCTCCAAGGGTTGGCGCGAGGTTCGTGACTCAGCCGACGCGGATCTGCAACTCATGAAGGACCGAGCCAACTCGTTCAAGAATTTAGCGACGTCGTTCGACCGGGAGCTTGAGAATTTCTTTAATTCCGCGGCTCCGGCGTTCTCTGTCCCCGCCATGCGCTCTGCTTCTCCGCCTCCGGCGGAGATCGAGTTCGTGAAGAAGCTGCAGCCAAAGCTCTCGGAGTTTCGACGCGCGTACTCGTCGCCGGATTTTAGCAAGAAAGTTCTGGAGAAGTGGCGGCCGAGGGCGAGGATTCGAATTGATTTGTCCGCCATCAAGAACGCGATTGTTTCGGAGGAAATTGATGAAGGGATTGTGGATTTTGAGAGGGGGAAGAGGGAGAGGAGGTTGAGCTTCTGGGAGGAGTTGAAGGGAGAGGGTGAAGCTCAGGATTGGGAGCCAATTCGAGCATTGAAGACTAGGCTTAAGGAATTTGAGAAGCGTAGTTCCTCTGTTGAGTTTTTTGATGGCTTCAAGAACAGTGAATTTCTCGAGAAACTCAAGTCTAGCCTGAAATCAATGTGCAAGGAGCCTCGAGATTCAAAGGAAGTGCCACCACTGGATGTAGCTGAACTTCTGGCCTACTTTGTTAAACAGTCTGGGCCATTTTTGGATCAACTTGGAGTCAGAAGAGACGTATGTGACAAGATAGTTGAAAGCTTGTATAGCAAACGCAAGAACCAACTTCTATTGCCGTCCCTTTCTGGAGAAGAATCTTCCCTTCTTGGGAATGGAAACATAAATGATGAGTTGGATTTGCGAATAGCTAGTGTTCTTCAGAGCACAGGGCACCGGAATGAAGGTGGCTTCTGGACAGACCATGCAAAGCATGATTTGTCTGACAATGAAAGACATGTTGCAATAGTCACAACTGCTAGTCTGCCTTGGATGACGGGAACAGCTGTAAACCCGCTGTTTCGAGCTGCATATTTATCACAATCTGAAAAGCAGAAAGTCACTCTGCTGGTTCCATGGCTTTGCAAATCAGATCAAGAACTAGTTTATCCCAGCAATCTCACTTTCACTTCACCTGAGGAGCAGGAAGGTTATATACGTAATTGGCTCGAGGAAAGGATTGGTTTTAAGGCAGACTTCAAAATTTCTTTTTATCCTGGCAAGTTTTCACAAGCAAGACGAAGTATAATACCTGCTGGAGATACTGCTCAATTTATACCATCCAAGGATGCTGACATTGCTATCCTAGAAGAACCAGAACATTTGAATTGGTATCATCATGGTACGCGTTGGACGGATAAATTCAACCATGTTGTTGGTATTGTTCACACAAATTACTTAGAATACATCAAGAGGGAGAAAAATGGGGCACTCCAGGCATTCCTTGTGAAACATATAAACAACTGGGTTGCAAGAGCGTACTGCGACAAGGTTCTTCGTCTCTCAGCTGCTACTCAGGATTTACCCAAGTCTGTAGTTTGCAATGTTCATGGCGTGAATCCCAAATTCTTAAAAATTGGAGAAAGTATTGCTGCAGAGAGGGAGCTTGGGCAGAAAGGCTTCACTAAAGGGGCATATTTCTTGGGAAAGATGGTATGGGCAAAGGGATATAAGGAGTTGATAGATTTATTAGCAAAGCACAAGGCTGACCTTGATGGCGTTAAGTTGGATGTATTTGGAAATGGTGAGGATGCTAATGAAGTTCAGAGTGCAGCTAGGAGGTTCGATTTGAATCTCAACTTTCAGAAAGGAAGAGATCATGCCGATGATTCTCTTCACAGGTACAAAGTCTTCATAAATCCTAGCATTAGCGATGTGCTATGTACAGCTACAGCTGAGGCACTTGCAATGGGAAAATTTGTAGTTTGTGCTGATCATCCATCAAATGAGTTCTTCAGGTCGTTTCCCAATTGTTTGACTTACAAGACTCCTGAAGACTTTGCAGTAAAAGTTAAAGAAGCATTAGCAAATGAGCCTTATCCTCTCACACCTGAACAAAGATATCAACTATCTTGGGAGGCTGCTACTCAAAGATTTATGGAATATTCCGAGCTGGACAAGGTCCTGAACAAGGAAAAGGATGGTGCAAAACCAAGTAAAAATAATAGAAAGATCATGGCTAAATCAGCTTCGATGCCTAATCTGACAGAACTAGTAGATGGAGGATTAGCATTTGCTCACTACTGTCTCACTGGGAACGAATTCCTAAGATTATGTACTGGAGCGACACCGGGGACCCGGGACTATGACAAGCAGCACTGTAAAGACCTGAATCTCTTGCCTCCACAGGTAGAAAATCCTATTTATGGCTGGTGA 2361 0.4515 MASQRQPPSSSNAFSFLSKGWREVRDSADADLQLMKDRANSFKNLATSFDRELENFFNSAAPAFSVPAMRSASPPPAEIEFVKKLQPKLSEFRRAYSSPDFSKKVLEKWRPRARIRIDLSAIKNAIVSEEIDEGIVDFERGKRERRLSFWEELKGEGEAQDWEPIRALKTRLKEFEKRSSSVEFFDGFKNSEFLEKLKSSLKSMCKEPRDSKEVPPLDVAELLAYFVKQSGPFLDQLGVRRDVCDKIVESLYSKRKNQLLLPSLSGEESSLLGNGNINDELDLRIASVLQSTGHRNEGGFWTDHAKHDLSDNERHVAIVTTASLPWMTGTAVNPLFRAAYLSQSEKQKVTLLVPWLCKSDQELVYPSNLTFTSPEEQEGYIRNWLEERIGFKADFKISFYPGKFSQARRSIIPAGDTAQFIPSKDADIAILEEPEHLNWYHHGTRWTDKFNHVVGIVHTNYLEYIKREKNGALQAFLVKHINNWVARAYCDKVLRLSAATQDLPKSVVCNVHGVNPKFLKIGESIAAERELGQKGFTKGAYFLGKMVWAKGYKELIDLLAKHKADLDGVKLDVFGNGEDANEVQSAARRFDLNLNFQKGRDHADDSLHRYKVFINPSISDVLCTATAEALAMGKFVVCADHPSNEFFRSFPNCLTYKTPEDFAVKVKEALANEPYPLTPEQRYQLSWEAATQRFMEYSELDKVLNKEKDGAKPSKNNRKIMAKSASMPNLTELVDGGLAFAHYCLTGNEFLRLCTGATPGTRDYDKQHCKDLNLLPPQVENPIYGW* 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0639 786 CDD Glycosyltransferase_GTB-type 445 647 - -
Lja1g0639 786 PANTHER DIGALACTOSYLDIACYLGLYCEROL SYNTHASE 1, CHLOROPLASTIC 10 786 - -
Lja1g0639 786 Gene3D Glycogen Phosphorylase B; 538 692 - -
Lja1g0639 786 Pfam Glycosyl transferases group 1 541 675 IPR001296 GO:0016757
Lja1g0639 786 PANTHER DIGALACTOSYLDIACYLGLYCEROL SYNTHASE 2, CHLOROPLASTIC 10 786 IPR044525 GO:0046481
Lja1g0639 786 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 316 696 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0639 Lja-Chr1 5934021 5939467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0639 12 609 Glycosyltransferase AT3G11670 71.358 0.0 856
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0639 K09480 - gmx:100796354 1397.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0639 1 5934021 5939467 Lja1g0639 1 5934021 5939467 ECH