Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0631 ATGGCGATTGATCCGGCGAGGACACCACTGGGGCAAATGCTATTGGAGGAGATCACACCGGTGGTGATGGTCCTTTCTACTCCTTCCGTAGAAGAGGCTTGCCTCAAGAACAACCTCTCATTTCTCCAGATGCTTACTCCGTTCTGCTCCTTCAACGACATCGACGTGCCGGTGAGGACCGCCAGTGACCAGCCTTATCGCCTTCACAAGTTCAAATTGCGCTTGTTCTATGCTTCCGATGTCAGGAAGCCCGATTTGAAGGAAGCTAAAGAGCAATTGAAGCAAGTTATCACAGATGCGGGGGAGAAAGTGTCTTCCGAGTTGGATTCAGATGTGCCAGAAATCAATCATGAACTTGGGAGTTCTGAATACAGTAATACACCATCCTGGTTTCAGTTTTTCAATAAAGAGCTTGTTCGAATGGCCTCCTTTTCAGATCATGAAGCTTTTGACCATCCCGTGGCATGTCTTCTAGCTGTTTCTTCAAAGGATGAACAGCCTATTAACAGATTTATTGACCTTTTCAATACCAACAAGCTTCCTTCCCTTCTTAATGATGGTGCCATGGATCCAAAGATTTTGAAGCATTACCTGTTAGTGCACGATAATCAAGATGGTCCTGCCGACAGAGCAAGTAAAATATTGACAGAAATGAGGAATACATTTGGTACAAGTGACTGTTTGTTGCTCTGCATTAATTCTTCACCAGATGCTTCGATCAATTATCAAGATAATCCTTGGGCTTCTAATATATCTGGCTCTTCAACTAGTCAAGATGTCGGTTGCTTTCTTAACGTTGATGATATCAATGAGATCAAAGATTTAATGCAAGATTTATCATCTAAGCACATCATTCCAAGCATGGAGCAAAAAATTCGTGTGCTCAATCAACAGGTTTCTGCAACACGAAAAGGTTTTAAAAACCAAATAAAAAATTTATGGTGGAGAAAAGGGAAAGACGATGGTGCAGATTCTCCCAATGGTCCTATGTATAACTTTAACTCCACTGAATCCCAGATTCGAGTTTTGGGTGACTATGCTTTCATGTTACGAGATTATGAACTTGCCTTGTCAAATTATCGCCTAATTTCCACGGATTACAAGATTGATAAAGCCTGGAAGCGTTATGCTGGCGTGCAGGAAATGATGGGACTTGCGTACTTCTTGTTGGATCAATCAAGAAAAGAAGCCGAGTATTGCATGGAAAATGCTTTCAACACATATTTAAAACTTGGGTCATTGGGTCAGCAAAATGCAACACGATGTGGTCTATGGTGGATAGAAATGTTGAAGGCACGAGATCTATATAAGGAGGCGGCTACTGTTTATTTTCGTATTTGTGGTGAGGATATCCTACATTCTGCTGTGATGCTTGAACAAGCATCGCACTGCTACTTGGTTTCTAAACCCTCCATGTTACGCAAATATGGATTTCATCTAGTGCTTTCCGGTGAGCAGTACAAAAAGTGTGATCAGATCAAACATGCAATTCGAACATACAGAAGTGCTCTGTCTGTTTGCAGAGGAACTACTTGGAGTTACATCAATGATCATGTTCATTTCCACATAGGACAGTGGTATGCTTCTCTTGGGATGTATGATGTGGCTGTCAAGCATATGACGGAAATCTTGGCTTGTAGTCACCAGTCCAAGACAATGCAGGAAATATTCCTAAGTGACTTTCTCCAAATTGTGCAGAAAACTGGACGAACTTTTGAGGTAACAAAACTTCAATTGCCTGTAATCAACATCTCTTCACTCAAGGTCATCTTTGAAGATCACCGAACTTTTGGATCACTTTCAGCTGCTAACACTAGAGAGGACCTGTGGCATTCTCTGGAAGAAGAAATGATACCATCATTCTCTGTTGTCAAGTCTAATTGGTTGGAGTTGCAATCAAAGCTTATTTCAACAAAGCTCAGTCGATCAAATGTCTGTGTCGCTGGAGAAGCTGTGAACGTTAATATTGAATTCAAAAACCCTCTGCAAATCTCAATTCCCATATCTGGTGTTTCACTCGTATGCAAATATTCTGCTAGTACTGATGAACTTACATCAGATAAAATTGAAACAAGGGTGGAGACTGATATTGAAGTTGACCACTTCAGGGATATGAGCTCAGACAATTCCTCATTTTTAGTATCTGAGGTTGATTTCTTACTAGGAGATGGTGAAACAACCATGGTTCAACTATCAGTTACTCCCATGGCAGTAGGTACTCTTGAAATTCTTGGTGTTCGATGGAAATTGTCTGGTACAATAGTTGGCTTTCACAACTTTGAATTGAGCCACCCAAAGAAGAATATTGTAAAAGGAAGAAGGAAAGCAAAGCTCTCTCCTAATGAGAAATTTAAATTTATGGTGATCAAGAGCATACCCAAGCTTCAGGGTTCTGTTCAATCTTTACCTGGAAAGGCATATGCTGGAGATTTACAGCAACTTGTGCTGGAGTTGAGGAATCCATCTGAGTTTCCTGTTAAGAGTCTGAAGATGAAGATAAGTCATCCCAGATTCCTGATTATCGGGAATCAAGAAAATATGAAGTCGGAGTTTCCTGCATGCTTAACAAAAAAGATAAATTCAGTGCAAGGTGATGCACATGCTAATCCTAATATCATGTCTGACACTGTCTTTTCATTTCCAGAGGGCACTTCAGTTCAAGGTGAAACACCCTTGCTGTGGCCTCTTTGGTTTAGGGCTGCTGTTCCAGGTGATATTTCTCTTTACATGAGCATATATTATGAAGTGGGAGATACATCAAGTGTCATTAAATATCGCACTCTTCGCTTGCATTGCAACGTGAAGGTATTACCATCCTTGGATGTCTCGTTTCAAATCAGTCCTTCTCGGTTAAGAGTACAAGAATTTCTTGTTCGATTGGATGTTATTAACAAGACAAGTTCAGAAGGCTTCCAAGTTTATCAGTTGTCCACTATTGGGCAACACTGGGAAATCTCTTTACTTCAACCTCCTGACACTATTTTTCCTACACAAACTTTGACGGCTGGTCAAGCAATATCATGTTTCTTCACACTGAAGAACTCCGGTAAATTATCAGCATCGGCGGAAAACACATCTACTATGCCTGTCAGAAGTGATGTAAAATTGGTTGCTCAAAGCAGTGAGGATTTAGTTTACGATACAAATAGTCTACCTTTGGTCAATTTCCACCATTATGAAAGACTGCATCAGAAAGCGTCGCAGGACGTTGGTGACTCAAATACTGTTGATTTTTTGTTGATCTCTCGGCCAATCACGAGTAACAACAATCCTAGTTTATCTTATTCTCATCATGTTATGTCACATCATGTGTGTCACTTAAGTACTGCTTGCACGGGGCCCATTTCATGGCTAGTGGATGGACCACAAACCTTGCAACATGACTTCTCTGCATCCTACTGTGAGATAAATCTGAAGATGCATCTTTACAATTCATCTGGTGCGACTGTATTTGTGCGTATTGACACCTTAGATTCTGCTAGTAATGTTGGTCACATGAACAGTGTAAATGTGGCTCAATCAGCAACTCCTGATAACCAATCAGGATGGCATGATGTCACACCAGTGAATGAATCCAAAGTAACATCAAATGTTCTTGAAACCCAACCAGGAAAGGCACTATCTCTGGAAAGTGTCTCCTCGCATATTTGGTCTGGATCAAGCTCAACCAATCTCCACCTTGGTCCTTTGTCATCTGCAGAAATTCCTCTTCAGATCTGTGTGTTCTCTCCAGGGACATATGACTTGTCAAATTATGTTCTTAATTGGAATATTCAATCCGGAGGTCAAGTTGAAAGTGACGAAACTAGAAAGCATTCAGGAAAGTGTCATGGTTATAAATACTATCTTACTGTGATCCAATCCACTTGA 3870 0.408 MAIDPARTPLGQMLLEEITPVVMVLSTPSVEEACLKNNLSFLQMLTPFCSFNDIDVPVRTASDQPYRLHKFKLRLFYASDVRKPDLKEAKEQLKQVITDAGEKVSSELDSDVPEINHELGSSEYSNTPSWFQFFNKELVRMASFSDHEAFDHPVACLLAVSSKDEQPINRFIDLFNTNKLPSLLNDGAMDPKILKHYLLVHDNQDGPADRASKILTEMRNTFGTSDCLLLCINSSPDASINYQDNPWASNISGSSTSQDVGCFLNVDDINEIKDLMQDLSSKHIIPSMEQKIRVLNQQVSATRKGFKNQIKNLWWRKGKDDGADSPNGPMYNFNSTESQIRVLGDYAFMLRDYELALSNYRLISTDYKIDKAWKRYAGVQEMMGLAYFLLDQSRKEAEYCMENAFNTYLKLGSLGQQNATRCGLWWIEMLKARDLYKEAATVYFRICGEDILHSAVMLEQASHCYLVSKPSMLRKYGFHLVLSGEQYKKCDQIKHAIRTYRSALSVCRGTTWSYINDHVHFHIGQWYASLGMYDVAVKHMTEILACSHQSKTMQEIFLSDFLQIVQKTGRTFEVTKLQLPVINISSLKVIFEDHRTFGSLSAANTREDLWHSLEEEMIPSFSVVKSNWLELQSKLISTKLSRSNVCVAGEAVNVNIEFKNPLQISIPISGVSLVCKYSASTDELTSDKIETRVETDIEVDHFRDMSSDNSSFLVSEVDFLLGDGETTMVQLSVTPMAVGTLEILGVRWKLSGTIVGFHNFELSHPKKNIVKGRRKAKLSPNEKFKFMVIKSIPKLQGSVQSLPGKAYAGDLQQLVLELRNPSEFPVKSLKMKISHPRFLIIGNQENMKSEFPACLTKKINSVQGDAHANPNIMSDTVFSFPEGTSVQGETPLLWPLWFRAAVPGDISLYMSIYYEVGDTSSVIKYRTLRLHCNVKVLPSLDVSFQISPSRLRVQEFLVRLDVINKTSSEGFQVYQLSTIGQHWEISLLQPPDTIFPTQTLTAGQAISCFFTLKNSGKLSASAENTSTMPVRSDVKLVAQSSEDLVYDTNSLPLVNFHHYERLHQKASQDVGDSNTVDFLLISRPITSNNNPSLSYSHHVMSHHVCHLSTACTGPISWLVDGPQTLQHDFSASYCEINLKMHLYNSSGATVFVRIDTLDSASNVGHMNSVNVAQSATPDNQSGWHDVTPVNESKVTSNVLETQPGKALSLESVSSHIWSGSSSTNLHLGPLSSAEIPLQICVFSPGTYDLSNYVLNWNIQSGGQVESDETRKHSGKCHGYKYYLTVIQST* 1290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0631 1289 Gene3D Tetratricopeptide repeat domain 332 556 IPR011990 GO:0005515
Lja1g0631 1289 PANTHER TRANSPORT PROTEIN TRAPP 10 1288 IPR024420 -
Lja1g0631 1289 SUPERFAMILY TPR-like 430 552 IPR011990 GO:0005515
Lja1g0631 1289 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 641 831 IPR013935 -
Lja1g0631 1289 Pfam ER-Golgi trafficking TRAPP I complex 85 kDa subunit 189 520 IPR024420 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0631 K20305 - gmx:100809666 2181.76