Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0626 ATGAAAGGAATGAGAGGAACCTTTCTTAGAAAATTTAAACTCATCCCAACCATAACCAACTTGAAACAAGGCCTTGTTCTTCAGCTCAACCCCCCAGATAATGTGTTCTGCATCAAGAAATCTCCAACACCACCAATCCATGATGACCACAAACAAAGCAACATGGCTGAGCTAGAGATTAATGCAATTGAGGATGATAAGGACTTTGAGGAAAAAGAATTCAGTCTCAGCAATTTGTCAGAAGAGAATTTGGTGGCTCCTAATTTGTCAGAGACCAAGATGGAGCCAAATAGCAAACAGTTGCCATGCATCAAAGAACACCCATCTCTCACAGATTTTGAAGAGATTTGTCCACCAGGATCAGGAAGCAATTCAATCATTCTCTACACAACAAGCTTGAGAGGGATAAGAAAAACCTTTCAGGATTGCAACACTATCAGGTTCTTGTTGAGAAGCTTTAAGGTAATATACCATGAAAGGGATGTGTCTCTACACTTGGAATACAGAGAGGAGCTGTGGAAGATCTTGGGTGGCAGATTGATTCCCCCAAAGCTGTTTATCAAGGGCAGGTACATTGGAGGAGCTGATGAAGTGGTTGGATTGCATGAGATGGGTTGGCTTGGTAAGTTTTTGGAAGGAACAGAAATTGATTCTTCTGAGAGCTCCTGCATTGGCTGTGCCAACATGAGATTTGCAATTTGCTCTGCCTGTTCTGGCAGCTGCAAAGTCTTCACCAGCAATGGTGACAACAGTGATGAATTGTTCCTCAGATGTGCTGAGTGCAATGAAAATGGGTTGGTTAAATGCCCCATTTGCTGCTAG 822 0.4258 MKGMRGTFLRKFKLIPTITNLKQGLVLQLNPPDNVFCIKKSPTPPIHDDHKQSNMAELEINAIEDDKDFEEKEFSLSNLSEENLVAPNLSETKMEPNSKQLPCIKEHPSLTDFEEICPPGSGSNSIILYTTSLRGIRKTFQDCNTIRFLLRSFKVIYHERDVSLHLEYREELWKILGGRLIPPKLFIKGRYIGGADEVVGLHEMGWLGKFLEGTEIDSSESSCIGCANMRFAICSACSGSCKVFTSNGDNSDELFLRCAECNENGLVKCPICC* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0626 273 Coils Coil 53 73 - -
Lja1g0626 273 Gene3D Glutaredoxin 124 219 - -
Lja1g0626 273 CDD GRX_GRX_like 125 269 - -
Lja1g0626 273 PANTHER GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN CG12206-RELATED 1 273 - -
Lja1g0626 273 PANTHER EMB|CAB81925.1-RELATED 1 273 - -
Lja1g0626 273 Pfam Glutaredoxin 126 192 IPR002109 -
Lja1g0626 273 ProSiteProfiles Glutaredoxin domain profile. 114 218 - -
Lja1g0626 273 SUPERFAMILY Thioredoxin-like 121 212 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0626 Lja-Chr1 5751127 5751948 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0626 K17479 - gmx:100788402 351.288