Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0620 ATGGAGTCTGATAGTGCACTGATTTTTGGAGACAAACTCATTCTGAGGGGATTGACGTTTCATGGTTTTCATGGAGTGAAGCCTGAAGAAAGAACGCTGGGCCAGAAGTTTCTGGTTGATATTGATGCTTGGATGGATCTCAAGGCTGCTTGCAACTCTGATCACTTGTCTGATACTCTTAGTTATACTGAAATCTATGATGTAGCTAAGGAAGTTCTTGAAGGGCCTCCTCAGAACCTTCTGGAGTCTGTGGCCCAAAAAATTGCAATAACTACTCTGACAAATCATTACCAGATATCTGCTGTTCGTGTGAAGCTTGGAAAGCCTCATATTTCAGTTCGGGGTCCAGTTGATTACATAGGCGTAGAGATTCTTAGGCGCAGAAGTGATTTGCCAGAGTAG 402 0.4328 MESDSALIFGDKLILRGLTFHGFHGVKPEERTLGQKFLVDIDAWMDLKAACNSDHLSDTLSYTEIYDVAKEVLEGPPQNLLESVAQKIAITTLTNHYQISAVRVKLGKPHISVRGPVDYIGVEILRRRSDLPE* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0620 133 TIGRFAM folB: dihydroneopterin aldolase 11 125 IPR006156 GO:0004150|GO:0006760
Lja1g0620 133 Gene3D - 10 130 IPR043133 -
Lja1g0620 133 PANTHER 7,8-DIHYDRONEOPTERIN ALDOLASE 10 129 - -
Lja1g0620 133 CDD DHNA_DHNTPE 11 127 IPR006157 GO:0004150|GO:0006760
Lja1g0620 133 Pfam Dihydroneopterin aldolase 14 124 IPR006157 GO:0004150|GO:0006760
Lja1g0620 133 TIGRFAM folB_dom: FolB domain 11 128 IPR006157 GO:0004150|GO:0006760
Lja1g0620 133 SMART FolB_2 13 126 IPR006157 GO:0004150|GO:0006760
Lja1g0620 133 PANTHER DIHYDRONEOPTERIN ALDOLASE 1-RELATED 10 129 IPR006156 GO:0004150|GO:0006760
Lja1g0620 133 SUPERFAMILY Tetrahydrobiopterin biosynthesis enzymes-like 11 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0620 Lja-Chr1 5694544 5696233 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0620 K01633 - gmx:100527653 219.935