Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0608 ATGGCGAAAGTAGCCACGGCAAGTTCCGTCCCTCCGAGCTCTCATCGAATCAGTGCAGGACCTTTGAAAAGTGGATCCATGGTTAAAAGAAAGACGCCATCGGAACTTAGGGGAGAGCAGTTGAAGCGGGCAAGTGCTGTGGACCTTACTGATGAATCTCCATCCTCTCTTGCTGGTTCTTCAAATGCTGCTGAGGTTGGTAATGGATTTAGAAAACCGGGATCGTTTAAGCCTCCTCGATACACCGAGACGCGACTCGATGAAGTGTTTACTGCTAAAAAGTCAAGGTTTAGAGTTGTATCTGTCAAGGAAAATGCAAAGGAAAATCAAACTATGGAGAAAACTAGTACTCTGAAAAATATGTCTCTTTTTTCTACTTTAGAGGCTAAGAGACCGCAAGGGGCTTCATGCTTGGAGAGCTCTGGCACTTCCACTGAGGCCAGGATAGATGGTCCATTGCAAGCTTGTCAAACTAATGAAAAGTGCGGCCAAGGGAAGTTTCTTAGTGTTTCTGAGCTTTCACAAGCTGCTGATAAATCTTCTGGCTTGGCAGCATCTATTGACATGGGCAAAGCACTTAGAGGACTAGCTGCATTTGAACCACAGGTTGATAATGGCTTAGCTGACGATTCATCTGAAAGACATGGAGAATTGAAATCAAGCATCAACGGAAGTTTCTTCTCTGAATGTCATGTACCCGGCCAGAAGGCTCCTCTGGATCTTACTCTAAAAACCAGTATGCGAATAGTTTCTTCCTCTTCAGTAAATTGGTCAGTTATGCGTGGTACCATGTCTCAACCAGCCTTCCAGCAATGTCCTATTAAAAGTCCAAACACGAGAGGTTCCCAGGGCTTCAAAGTTTTGCATTCATGGTTGTATCCCCAATCTGTTCTGCCACCTTCGCTGATATCAGTGTTGAGCTCATCAACTGCAGATGCAGAATTGGAGTTCTTAAAAAAACGACAAGTAGCTTGGGAAGAATCCTTTCGAGACCTCTATTACATGCTCCGGAAGAACATCTGCGGCCTCTTTTATGTTTGCACTTCACAGTTTGTGGTGATGTTCACGGGTGGTGACAGCACAGGGAGATCCAAATGCTCATGCAATGCTTATATCTCTCAATCAACCATAGGTTTGAGATCATTGCTAAAAGAGCATGATCTTTGTTTCTCTATGCCTCTCTGCCATTCGAAAGTGGAACAAGCTGCTACTGAGGATCTAGTTGAGCTGTCAGAGATAGAGAAGCAAAATTTAGGACAGACCCGGCGGATAAGGTCATTCTCTGACATTGACAATAGCCCGCAATCTTTGTTGGTTTTCAGCGGCAACAACAATGTACATGGTTTATATGACTTTTTACTAAATTACAGAACTCTCTTGACCTCTCTGTCTGGTGTTGACGTACCTGTCTTGTGCTCTCCTGTGCCGTTTCAGAATTCGGCTCTGTCTTCTCCTGATATTAAATGCATGGAGACAAGGAGAGCTGAACATTTTGGTGCTTCTTATAATGAATCTATTGGGAAAGATGGCGAGTCTGCACCAGATGGCCTTTGCTATAGCATTGAAATTAAGGATGCACTTCTTCCACCTTGGATTATTTGTGGTATGTGTGCATTGATTGGCTCTGAAGGGAGAAGCTTTGAAGCAAGTTTTGTGGCGGAACCTAGCTCAATTGGCTTGAATGTAGCGTTAAAACCAACTTGTGAGAAGTCAGAATCTAAGGCTGCTGGCAGTAAAAGCTTGGAAGACTGCAGTGATACCTTTGGCATTCCAGAAGCGGTAGTCACGTCTAGCATGTGGTCATGTTCAGTTAAAAGCTTAAAGTACTGCAATGCTTCTTATACAGCATCCCTGTCCCCTGTATAA 1866 0.4405 MAKVATASSVPPSSHRISAGPLKSGSMVKRKTPSELRGEQLKRASAVDLTDESPSSLAGSSNAAEVGNGFRKPGSFKPPRYTETRLDEVFTAKKSRFRVVSVKENAKENQTMEKTSTLKNMSLFSTLEAKRPQGASCLESSGTSTEARIDGPLQACQTNEKCGQGKFLSVSELSQAADKSSGLAASIDMGKALRGLAAFEPQVDNGLADDSSERHGELKSSINGSFFSECHVPGQKAPLDLTLKTSMRIVSSSSVNWSVMRGTMSQPAFQQCPIKSPNTRGSQGFKVLHSWLYPQSVLPPSLISVLSSSTADAELEFLKKRQVAWEESFRDLYYMLRKNICGLFYVCTSQFVVMFTGGDSTGRSKCSCNAYISQSTIGLRSLLKEHDLCFSMPLCHSKVEQAATEDLVELSEIEKQNLGQTRRIRSFSDIDNSPQSLLVFSGNNNVHGLYDFLLNYRTLLTSLSGVDVPVLCSPVPFQNSALSSPDIKCMETRRAEHFGASYNESIGKDGESAPDGLCYSIEIKDALLPPWIICGMCALIGSEGRSFEASFVAEPSSIGLNVALKPTCEKSESKAAGSKSLEDCSDTFGIPEAVVTSSMWSCSVKSLKYCNASYTASLSPV* 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0608 621 PRINTS Downstream neighbour of Son (DONSON) protein signature 328 341 IPR024861 -
Lja1g0608 621 PRINTS Downstream neighbour of Son (DONSON) protein signature 341 356 IPR024861 -
Lja1g0608 621 PRINTS Downstream neighbour of Son (DONSON) protein signature 237 249 IPR024861 -
Lja1g0608 621 PANTHER PROTEIN DOWNSTREAM NEIGHBOR OF SON 18 615 - -
Lja1g0608 621 MobiDBLite consensus disorder prediction 30 46 - -
Lja1g0608 621 PANTHER DOWNSTREAM NEIGHBOR OF SON 18 615 IPR024861 -
Lja1g0608 621 MobiDBLite consensus disorder prediction 1 81 - -
Lja1g0608 621 MobiDBLite consensus disorder prediction 49 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0608 Lja-Chr1 5587977 5594490 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0608 K22422 - gmx:100796531 857.825