Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0598 ATGGTGAAACCAAAGAAAAGGGACACTGGAAAAGTTCCTGGTAAAAAGAGTGGTACTGCACATCGCCTTAATGATACTCCAGGCCTTGAAAATCAGCATGAGGATGGTGATTGGGTTATAGTGAAAAAGCAGAGAGTCACCATTCTGGTGTCTGCTGCACCTCGTGGCGAGGGAGACCAAGAACCGAGTCATGTGCATCCTATGCCTCCTGGAACGTTAAGTAGTAACCGCGTGGAGCTTCCCATGGAGACTTCTACACTAAATCCTTCAGGTAGTGAACACGAGAAGACCATTCTACCAGCTGCCGAAGAGGAGACTCGCGCTGTGGGAAGAGCTTCTCCTCCCTTACCCAAATCACCTTTAGCCAATTCCCCATGGGTGGATCAAAGAATAGAACCAGAAAATCCACATCAAGTGAGTACTTTGAAGTCACATGAATTACTTGGAGTATCTAATGCATCAAAAGCTATTAGGCAGCCCAGAACATTACTTGCACCAAGAATGTCTTCCAATTTGGTTACTCTAAGTCATGGTCTGCGGGCATCGAATCTGACAAGAAAGCTAGAAAGAGCTGGTGGGTTGAGCAGGTGGCTGACATCACTTGGACTGGAGCAGTTTGTGAGAATTTTTCAAGGGAAGAGAGTCAGCAAGTATCACCTAGCTAACCTCACCATGCAAAAACTCAAGGATATGGGCGCCAGTGCTGTCGGACCTCGCAGGAAACTGATCCACGCCATCGACTGTGTTTGCCAGCCATATTGCTTTGAGGCCCTATAG 777 0.4736 MVKPKKRDTGKVPGKKSGTAHRLNDTPGLENQHEDGDWVIVKKQRVTILVSAAPRGEGDQEPSHVHPMPPGTLSSNRVELPMETSTLNPSGSEHEKTILPAAEEETRAVGRASPPLPKSPLANSPWVDQRIEPENPHQVSTLKSHELLGVSNASKAIRQPRTLLAPRMSSNLVTLSHGLRASNLTRKLERAGGLSRWLTSLGLEQFVRIFQGKRVSKYHLANLTMQKLKDMGASAVGPRRKLIHAIDCVCQPYCFEAL* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0598 258 MobiDBLite consensus disorder prediction 53 76 - -
Lja1g0598 258 PANTHER F26K24.15 PROTEIN-RELATED 1 257 - -
Lja1g0598 258 MobiDBLite consensus disorder prediction 1 15 - -
Lja1g0598 258 MobiDBLite consensus disorder prediction 1 37 - -
Lja1g0598 258 Pfam SAM domain (Sterile alpha motif) 194 248 IPR001660 GO:0005515
Lja1g0598 258 SUPERFAMILY SAM/Pointed domain 193 251 IPR013761 -
Lja1g0598 258 ProSiteProfiles SAM domain profile. 194 252 IPR001660 GO:0005515
Lja1g0598 258 SMART SAM_4 186 252 IPR001660 GO:0005515
Lja1g0598 258 CDD SAM_superfamily 194 248 - -
Lja1g0598 258 Gene3D - 189 247 IPR013761 -
Lja1g0598 258 PANTHER SCP160 1 257 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0598 - - gmx:100804141 347.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0598 1 5456490 5458312 Lja1g0598 1 5456490 5458312 ECH