Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0597 ATGGAGCATGACTCAAAGACCCCTTTGCTGGAATCTTCCAGAAAAACTTCAAAGCTCCAAACCTTGGGCAACATCATTGTCACCGTTGTCGGAACAGGGGTTCTGGGTTTGCCCTTTGCTTTCCGGGTAGCTGGGTGGGTTGCTGGATCGCTTGGAGTTGCTATCGTCGGCGTTTCCACCTACTATTGCATGCTCCTGCTTGTTTGTTGCAGAGATAAGTTGGCATCAGAAAAGGCATTAGGGGAAGGAGGAACATATGGAGACCTGGGTTATAGGAGCTTTGGAACCTTGGGCCGGATTCTGACAGAATTTATAATTTTAGTAGCACAGTGCGCAGGGTCTATTGCATATTTGGTATTTATTGGACAAAACCTTGATTCTATATTCCAAAGCAAGGAATTCTCGGTCACCTCATACATATTTATGTTAGTACCGGTTGAAATTGGATTGTCATGGATAGGGAGTCTATCTGCTTTAGCACCTTTTAGCATTTTCGCAGATGTGTGCAATGTCCTGGCTATGGGAATTGTGGTGAAGGAAGACGTACAGCAGGCGTTAGGAGATGGGTTTCCACTTGGACAAAGGACAGCAATCACGTCCAACATTAGGGGGTTGCCATTTGCAGCAGGCATGGCTGTTTTTTGTTTTGAGGGGTTCGGAATGACTCTTGCCCTGGAGAATTCTATGCAGGATAGATCTAAATTTCCAAAATTGCTGGCTCAAACTTTTAGTGGGATAACACTTGTGTACATTCTTTTTGGGTTATGTGGTTACATGGCTTTTGGTGAAGAAACCAAAGACATTGTGACCCTTAATCTCCCTAGAAATTGGTCATCTCTTACTGTACAGGTAGGATTATGTCTGGGGCTTGTTTTCACATTCCCTATCATGTTACACCCAGTTAATGAGATTGTGGAAGGAAAACTCAAACATGTCTGCAGAAACAATAATGATTCAACAAGTTTAGGAAATATTTCCATATACGTCAGTCGTGCCATTGTGGTGGTTCTGCTGGCTTTCATAGCTTCATTTGTGCCAGAATTTGGTGTATTTGCCTCATTTGTCGGGAGTACCTTATGTGCAATGCTCTCATTTGTTTTGCCTGCCATATTTCACCTAAAAATATTTGGCTCTTCTCTACGCATATGGCAAAAAGCCTTGGATTTTTTTGTATTAATCTGTGGATTACTTTTTGCTGTATATGGAACTTACAGCACAGTCGTTGGAGTTTGA 1233 0.4258 MEHDSKTPLLESSRKTSKLQTLGNIIVTVVGTGVLGLPFAFRVAGWVAGSLGVAIVGVSTYYCMLLLVCCRDKLASEKALGEGGTYGDLGYRSFGTLGRILTEFIILVAQCAGSIAYLVFIGQNLDSIFQSKEFSVTSYIFMLVPVEIGLSWIGSLSALAPFSIFADVCNVLAMGIVVKEDVQQALGDGFPLGQRTAITSNIRGLPFAAGMAVFCFEGFGMTLALENSMQDRSKFPKLLAQTFSGITLVYILFGLCGYMAFGEETKDIVTLNLPRNWSSLTVQVGLCLGLVFTFPIMLHPVNEIVEGKLKHVCRNNNDSTSLGNISIYVSRAIVVVLLAFIASFVPEFGVFASFVGSTLCAMLSFVLPAIFHLKIFGSSLRIWQKALDFFVLICGLLFAVYGTYSTVVGV* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0597 410 PANTHER BNAA05G27230D PROTEIN 11 409 - -
Lja1g0597 410 Pfam Transmembrane amino acid transporter protein 15 407 IPR013057 -
Lja1g0597 410 PANTHER AMINO ACID TRANSPORTER 11 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0597 Lja-Chr1 5450792 5454155 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0597 4 410 Organic Solute Cotransporters AT3G11900 62.233 0.0 533
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0597 K14209 - gmx:100305659 654.44