Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0587 ATGGAGGTTGAGGGTGCAGGTGCGGGTGCAGCACTGTGGCAAGGTGCGGTTCTGGGTGGAATTCTCTTCTGGGTTGTGTTTTCTTCATACATCAATCTCACTCGCAAGCTTAGATCCTTCCTTCAACCCTCTGTGACTCACCTTGTTGATACCGGAACCCCTATTATCCTTCAGATCCAGGGTTACCGTGCTGGTTTGCTGGATGCTCTTTTCTCTGGGTTGTCTTGTGTTGTTTCTGTTCCCTTTTACACTGCTTTTCTCCCTCTGCTATTTTGGAGTGGTCATGGCAAATTGGCAAGGCAGATGACGTTGTTGATGGCGTTTTGTGATTATATTGGAAACTGCATAAAAGATGTGGTTTCAGCTCCAAGACCTGCTTCTCCACCTGTCTACAGAATAACTGCTACCAAAGATGAAGAAGAGAACGCCTTAGAATATGGACTTCCTTCTTCTCACACGCTTAATACAGTTTGCTTATCTGGCTACCTTTTGCACTATGTCCTGACTCATCCTCAAATTCAAGGTGCCTATATTAATTATCTTGGAGTGTCTCTCGGTTGCTTGTTTGTGGCTCTCATTGGTTTGGGAAGAATTTATCTTGGTATGCACAGTGTGGTTGATGTTCTTGCTGGCCTTCTTATTGGACTCGTGATCCTTCCATTTTGGCTCACAGTTGATGGATACATAGACAGTTTTGTGATTTCAGGACAAAATGTTACATCTTTTTGGGCTGCCTTGAGCTTCCTCTTGCTCTTTGCTTATCCAACTCCTGAACTTCCAACTCCAAGTTTTGAGTTTCACACTGCTTTCAACGGTGTTGCATTGGGAATTGTCTCTGGGGTACAGCAAACTTACCATCTATTTCACCATGATTCTGTTCCTCATTTGTTCTCTTCAGAACTGACAATACCGGCATATGTGGGAAGAGTGCTGTTGGGAATACCTACAATTCTAATTGTGAAGTTCTGCAGCAAGGCTCTTGCTAAATGGACTCTTCCTGTGGTAGCAAACACCTTGGGCATCCCAATTAAATCAACCAGCTACATCCCCACACTGAATGGATCCACAGCGGGGAAAACGTCCGATAAGCTCAAAGGAGGAGGTTACTTACAGAAGCTCTTTTCACACAAGGCATTCGATGTTGACACCGGAATTAGATTTCTTCAGTATGCAGGCCTTGCGTGGTCTGTGGTCGACCTCGTGCCATCTCTTTTTTCATACATGAGCTTGTGA 1233 0.4469 MEVEGAGAGAALWQGAVLGGILFWVVFSSYINLTRKLRSFLQPSVTHLVDTGTPIILQIQGYRAGLLDALFSGLSCVVSVPFYTAFLPLLFWSGHGKLARQMTLLMAFCDYIGNCIKDVVSAPRPASPPVYRITATKDEEENALEYGLPSSHTLNTVCLSGYLLHYVLTHPQIQGAYINYLGVSLGCLFVALIGLGRIYLGMHSVVDVLAGLLIGLVILPFWLTVDGYIDSFVISGQNVTSFWAALSFLLLFAYPTPELPTPSFEFHTAFNGVALGIVSGVQQTYHLFHHDSVPHLFSSELTIPAYVGRVLLGIPTILIVKFCSKALAKWTLPVVANTLGIPIKSTSYIPTLNGSTAGKTSDKLKGGGYLQKLFSHKAFDVDTGIRFLQYAGLAWSVVDLVPSLFSYMSL* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0587 410 Pfam PAP2 superfamily 102 224 IPR000326 -
Lja1g0587 410 SMART acid_phosph_2 99 223 IPR000326 -
Lja1g0587 410 Gene3D Phosphatidic acid phosphatase type 2/haloperoxidase 130 238 - -
Lja1g0587 410 PANTHER PHOSPHATIDIC ACID PHOSPHATASE TYPE 2/HALOPEROXIDASE-RELATED 12 409 - -
Lja1g0587 410 CDD PAP2_SPPase1 66 223 - -
Lja1g0587 410 PANTHER SPHINGOSINE-1-PHOSPHATE PHOSPHOHYDROLASE 12 409 - -
Lja1g0587 410 SUPERFAMILY Acid phosphatase/Vanadium-dependent haloperoxidase 52 228 IPR036938 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0587 - - lja:Lj1g3v4763910.1 789.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0587 1 5362848 5367487 Lja1g0587 1 5362848 5367487 ECH