Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0569 ATGCAGGAAGCATCGGTGATAATCGTCGGAGGTGGAACCTCTGGAATCGCCACCGCTTCCTGTTTAACCAAGAAATCGATTTCTTACATCATGCTTGAGAGAGAAGACTGTTTTGCTTCCCTGTGGCAGAAATACACCTATGATCGCCTCCATCTCCACCTAAGGAAGCAATCGTGTGAGCTTCCACACTTTCCATTTCCACCTTCTTATCCCCATTACGTGCCAAAGAAGCAGTTCATAGAGTACTTAGACAACTATGTCAAGCATTTCAACATCAATCCTCTGTACCACAGAGCAGTGGAGCTAGCAGAACATGATAATAGTCACCAAAATTGGAGAGTGAAGGCTAAGAACAGAACCTCTGGTCATGTTGAAGAATATGCTGGCAAATTCTTGGTGGTGGCTACTGGTGAAACAGCTGAACCTCGCATACCTGAGGTTGAAGGGTTAGAGGGTTTCAAAGGGAAAGTGATTCATTCAACAGGGTATAAAAATGGGAAAGAGTTCAAAAATCAGAATGTTCTTGTTGTTGGATCTGGCAATTCTGGCATGGAGATTTCATTAGACTTGGCCAATTTTGGTGCTAAACCTTCCATCATTGTTCGAAGCCCGGTTCATTTTCTTACAAGGGATATGATGTATTATGCTGGAGAGTTGTTGAGGTATCTGTCTTTGAGCACGGTGGAGAATCTGGTGGTGATGGCTAGCAGGATTGTGTATGGGGATCTCAGCAAGTATGGCATACCTGTGCCCACTGAGGGCCCTTTCACCATGAAGATGAAGTATGGCAAGTTTCCTGTAATCGACGTGGGAACTGTAAACAAAATCAAATCTGGAGAGATTCAGGTGTTGCCAGCAGAAATAGAGAGCATAAGAGGTAACCAAGTGTTGTTCCGGGATGGCAAGTCGCAGCCATTTGACTCCATCATTTTCTGCACAGGCTTCAAAAGATCAACTAAAAAGTGGCTTAAGGGTGGTGATGATTTTTTGAACGAGGATGGCTTTCCAAAGCCTGGTTTACCAAACCATTGGAAGGGTAATAATGGTTTGTACTGTGTTGGACTGTCAAGGAGGGGATTTTTTGGAGCTAACATGGATGCCCAAAACATTGCAAATGATATTGCATCTTTAATTACTCAACAAGAGAAAAAGGAATTATTAGTGTAA 1167 0.4319 MQEASVIIVGGGTSGIATASCLTKKSISYIMLEREDCFASLWQKYTYDRLHLHLRKQSCELPHFPFPPSYPHYVPKKQFIEYLDNYVKHFNINPLYHRAVELAEHDNSHQNWRVKAKNRTSGHVEEYAGKFLVVATGETAEPRIPEVEGLEGFKGKVIHSTGYKNGKEFKNQNVLVVGSGNSGMEISLDLANFGAKPSIIVRSPVHFLTRDMMYYAGELLRYLSLSTVENLVVMASRIVYGDLSKYGIPVPTEGPFTMKMKYGKFPVIDVGTVNKIKSGEIQVLPAEIESIRGNQVLFRDGKSQPFDSIIFCTGFKRSTKKWLKGGDDFLNEDGFPKPGLPNHWKGNNGLYCVGLSRRGFFGANMDAQNIANDIASLITQQEKKELLV* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0569 388 Pfam Pyridine nucleotide-disulphide oxidoreductase 7 204 - -
Lja1g0569 388 PANTHER FLAVIN-CONTAINING MONOOXYGENASE 4 386 - -
Lja1g0569 388 SUPERFAMILY FAD/NAD(P)-binding domain 5 277 IPR036188 -
Lja1g0569 388 PRINTS Pyridine nucleotide disulphide reductase class-II signature 169 193 - -
Lja1g0569 388 PRINTS Pyridine nucleotide disulphide reductase class-II signature 5 27 - -
Lja1g0569 388 Gene3D - 1 381 IPR036188 -
Lja1g0569 388 PANTHER FLAVIN-BINDING MONOOXYGENASE-LIKE PROTEIN (AFU_ORTHOLOGUE AFUA_4G09220) 4 386 - -
Lja1g0569 388 PRINTS FAD-dependent pyridine nucleotide reductase signature 6 25 - -
Lja1g0569 388 PRINTS FAD-dependent pyridine nucleotide reductase signature 173 191 - -
Lja1g0569 388 PIRSF FMO 2 321 IPR000960 GO:0050660|GO:0050661
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0569 Lja-Chr1 5163272 5166008 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0569 K11816 - gmx:100777958 625.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0569 1 5163272 5166008 Lja1g0569 1 5163272 5166008 ECH