Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0558 ATGGTAGCCCTTGTACTCATTCTACTAACTGGTCTTGTTCAAGTTATCAATTCATCAGCCTTTAATGCGTGTTCAAATTGTGGTAACACTGCGGTTCCATATCCCCTCAGCACTAATGAGGATTGTGGTGACAAAAGGTACAAAGTTTACTGCAATAATGGCAGGTTAGAGTTCTTGTCAGCCACAGGAACTTACTACAAGATCCTTAGAATTGACCCAAGTGCTAACAAGCTTGTCATTACCCCACCCCTCATACAGAAACACACTTGTTATTCTTCTGATCTCAAAATGGGAGGATTTGTGCTTGATGAAAGCTTACCCTTCAATATATCTACACACAACACTGTCATGTTGTTTAATTGCTCTGATAATATCCTCTTGTCTCCTCTGAACTGTTCTTCAAACAGCATCTGTAGGCAGTTTGAAGAAAAGGTGGAGGAGGGAAGTGGGTGTGTGGATACCCTTTGTTGCCATTTCTTGAAAGACTCTGCCATGAATTCCCATAAGATCAGAGTCAGGGTTGGGACCTGCACTGCCTATACTTGTTTGGTGGATTTCAAGTCTAGTGATCCTCTTGATTCTTGGAAATATGGGATTGAGCTGCAATGGCTCCCTCCGACCTGA 624 0.4247 MVALVLILLTGLVQVINSSAFNACSNCGNTAVPYPLSTNEDCGDKRYKVYCNNGRLEFLSATGTYYKILRIDPSANKLVITPPLIQKHTCYSSDLKMGGFVLDESLPFNISTHNTVMLFNCSDNILLSPLNCSSNSICRQFEEKVEEGSGCVDTLCCHFLKDSAMNSHKIRVRVGTCTAYTCLVDFKSSDPLDSWKYGIELQWLPPT* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0558 207 Pfam Wall-associated receptor kinase galacturonan-binding 24 80 IPR025287 GO:0030247
Lja1g0558 207 PANTHER WALL-ASSOCIATED RECEPTOR KINASE CARBOXY-TERMINAL PROTEIN-RELATED 5 206 - -
Lja1g0558 207 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE PROTEIN 5 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0558 Lja-Chr1 5074582 5075399 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0558 24 206 Receptor kinase-like Gene Family AT5G02070 37.368 2.61e-35 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0558 - - cam:101515529 334.339
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0558 1 5074582 5075399 Lja1g0558 1 5074582 5075399 ECH