Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0553 ATGAAGACTGGATCGATGATTTTTTCGTTATTGCAACTACCTAGATGCAGAATACATAGCTTAGCTAATTATTGGGGTGAAACCTTCCCCAGCTTCAGTAACCCTCAAAATAATTCTAGCATCAGGCTGCTTAGTTCTAGAATCAATGGGCTTCAGGAAGGGCACAGAAAGAAGTGGACTCGAAGACCTATAACTACAAACACAGAAGGCAAGGGGGGCACCAAATCAAGAAGTACCAAGCATGAAATTTTAAGTGAAACTACTTTGACAAGTTCCACAGTAAGTGTAAATAAAACACAGCTAGGTGAATTCCAGGATATTCAGTACTGTGACGTTAAAGAGATTGCTCAGAAAAAGAACTTGTCTAGCCTAGTCACTGTTATTGCTTTTGATATTGAGACCACCGGGTTCGGCGCTAAGAATCATAGGATCATTGAGATTGCACTTAGAGACCTTCAGGGTGGTGAAAATAGCACCTTCCAAACTCTTGTAAATCCTCAACGCTATGTTCCTAATTCAGATGTTCACGGCATTACTAATCAGATGGTGAACAGCCCTGACGTTCCAAGGATGGAGGACCTTATTCCAATCTTGTTGCACTATGTTCGAAGCCGTGAGAAACCTGGGGGATATGTATTGTGGGTTGCTCATAATGCTCGCAGCTTTGATGTACCCTTCTTCATCAATGAGTTAGGTCGTTCTTCTGTCAAGATTCCTAGTAATTGGCTATTTTTGGACACCCTTCCTTTAGGTCGTGAACTAATGATGAAGTTGAAGGCGGAGTCTGAAGCCTTAACTTTTTACGGTGTCCCAGAGAAAAAACCTCCAGCAAACCTTGCTGCCCTCTGTGAGCACTACAATGTTAAACTAAATGGAGCAGCTCACAGAGCCATGGTGGATGTGGACGCATTGTCTGTAATCTTTTCCAGGTTGACTTTTGATCTGAAACTGACCCTATCTGACCTTGTCGAAAAATCATTCCAAGAATCAGATATTACCAAGAAGAAGAAGAATTCAGACTAG 1023 0.4194 MKTGSMIFSLLQLPRCRIHSLANYWGETFPSFSNPQNNSSIRLLSSRINGLQEGHRKKWTRRPITTNTEGKGGTKSRSTKHEILSETTLTSSTVSVNKTQLGEFQDIQYCDVKEIAQKKNLSSLVTVIAFDIETTGFGAKNHRIIEIALRDLQGGENSTFQTLVNPQRYVPNSDVHGITNQMVNSPDVPRMEDLIPILLHYVRSREKPGGYVLWVAHNARSFDVPFFINELGRSSVKIPSNWLFLDTLPLGRELMMKLKAESEALTFYGVPEKKPPANLAALCEHYNVKLNGAAHRAMVDVDALSVIFSRLTFDLKLTLSDLVEKSFQESDITKKKKNSD* 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0553 340 MobiDBLite consensus disorder prediction 54 80 - -
Lja1g0553 340 Pfam Exonuclease 128 304 IPR013520 -
Lja1g0553 340 PANTHER THREE PRIME REPAIR EXONUCLEASE 1, 2 3 337 IPR040393 GO:0008408
Lja1g0553 340 Gene3D - 125 329 IPR036397 GO:0003676
Lja1g0553 340 Coils Coil 334 340 - -
Lja1g0553 340 SMART exoiiiendus 126 317 IPR013520 -
Lja1g0553 340 PANTHER POLYMERASE III POLC-TYPE, PUTATIVE ISOFORM 1-RELATED 3 337 - -
Lja1g0553 340 CDD DEDDh 128 308 - -
Lja1g0553 340 SUPERFAMILY Ribonuclease H-like 124 316 IPR012337 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0553 - - gmx:100799702 431.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0553 1 5022171 5025914 Lja1g0553 1 5022171 5025914 ECH