Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0540 ATGGATTTCCAGAAGAAGAGGGTTCAGTTTCTGGTATCTGTTGCTGCCGTCATTGTTCTTAGCATCACAGCTGAAAAATGCAGGCACCTTGTTGGGGAGAAGGGGTCATCCCAAAGTGGAAAGTTCACAGTCTTAAATTGCTTTGACATGGGTTCAGGAACTTTAGCATGTGGTGTCAAGGAAGGTGTGAAGCTCTACATCAACAATATCAGAGCTGCTCATGTTGAAGGAGCAAGGCATGCCGCAATCCAATCTGCCCTCGCTGATGCCGCGTCGCAGGGGATGTCACCAGCTGATTCAGAAAAACGTGCTCAGAAAGAAGGTGCAAAGGCAGCGAAATTGGCTTCGCGCAAGGCGAAGCGCATTGTTGGTCCCATCACCTCTTCAGGATGGGACTTCTTTGAAGCTGTTTACTATGGTGGTACCTACACTGAGGGGTTCCTCAGGGGAACTGGTACTTTGTTTGGTACTTATGGTGGAGGCTTCTTTGGAGAGCAAAGGCTTGGGAGGTTTGGTTATCTTGTTGGAAGTCAATTGGGAAGTTGGGTTGGAGGTAGAATAGGGCTAATGCTATATGATGTGGCTAATGGAGTGCATTTCTTGTTGCATTTTGTTCAAAGTGATGGAAGTGAAGTTCAATAA 642 0.4688 MDFQKKRVQFLVSVAAVIVLSITAEKCRHLVGEKGSSQSGKFTVLNCFDMGSGTLACGVKEGVKLYINNIRAAHVEGARHAAIQSALADAASQGMSPADSEKRAQKEGAKAAKLASRKAKRIVGPITSSGWDFFEAVYYGGTYTEGFLRGTGTLFGTYGGGFFGEQRLGRFGYLVGSQLGSWVGGRIGLMLYDVANGVHFLLHFVQSDGSEVQ* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0540 213 PANTHER PROTEIN, PUTATIVE-RELATED 1 211 - -
Lja1g0540 213 PANTHER EXPRESSED PROTEIN 1 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0540 Lja-Chr1 4943861 4946027 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0540 - - lja:Lj1g3v4789610.1 383.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0540 1 4943861 4946027 Lja1g0540 1 4943861 4946027 ECH
Lja1g0540 1 4943861 4946027 Lja5g1376 5 13823642 13825872 PCT