Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0532 ATGGCAAGACTGGTGGTACCCCAACAGAACCAACTTTCTTTCTCTCCTTTAGCTTCCTCTCTTTCTGATTTCAGCGGAACCAGACTTCAAACTCAAATACAGTTCAGAAGAAAAGCATGGCAGCCAAAGGGCTTTCACGTCTCAGCATCAAGCACCAAGAAAATCCTCATAATGGGAGGCACCAGGTTTATTGGTGTGTTTTTGTCTAGGCTCCTTGTCAAAGAGGGTCACCAGGTGACTTTATTTACAAGAGGAAAAGCACCAATCACTCAACAATTGCCAGGTGAATCAGACAGTGACTTCTCTGACTTTTCCTCCAAGATCAAGCATTTGAAAGGAGACAGGAAGGACTATGATTTTGTAAAATCCAGTCTCTCAGCAGAAGGATTTGATGTTGTTTATGACATAAATGGACGAGAGGCAGAGGAAGTTGAGCCCATAATAGAAGCTTTGCCTAATCTGGAACAGTTCATTTACTGCTCTTCTGCTGGTGTTTATCTCAAATCTGATTTACTACCTCATGCTGAGGTTGATGCAGTTGATCCTAAGAGCAGGCATAAGGGAAAGCTTGAGACAGAGAGCTTGCTGCAATCAAAGGATGTTAATTGGACTTCTATAAGGCCAGTCTACATCTATGGACCCTTGAACTACAACCCTGTTGAAGAGTGGTTCTTCCACAGATTGAAAGCCGGTCGCCCAATCCCCATTCCGGGCTCAGGAATACAGATAACACAACTCGGTCATGTCAAGGATTTGGCAACAGTATTTGTTCAGGTTCTTGGTAATGATAAGGCCAGCAAACAAGTATTCAACATCGCAGGAGATAAGTATGTGACATTTGATGGATTAGCAAGAGCATGTGCTAAGGCTGGTGGGTTTCCAGAGCCAGAGATCATTCACTACAACCCTAAAGATTTTGATTTTGGGAAAAAGAAGCCATTTCCATTCCGTGACCAGCATTTCTTTGCATCAGTTGACAAGGCAAAGAGCGTGCTTGGATGGGAACCTGAATTTGGGCTTGTAGAAGGTCTTGCAGACTCATATAACCTGGACTTTGGTAGAGGAACTTTCAGGAAAGAGGCTGACTTTTCAACAGATGATATAATTCTGGGCAAGAGTCTTGTTAGCGTGTGA 1134 0.4339 MARLVVPQQNQLSFSPLASSLSDFSGTRLQTQIQFRRKAWQPKGFHVSASSTKKILIMGGTRFIGVFLSRLLVKEGHQVTLFTRGKAPITQQLPGESDSDFSDFSSKIKHLKGDRKDYDFVKSSLSAEGFDVVYDINGREAEEVEPIIEALPNLEQFIYCSSAGVYLKSDLLPHAEVDAVDPKSRHKGKLETESLLQSKDVNWTSIRPVYIYGPLNYNPVEEWFFHRLKAGRPIPIPGSGIQITQLGHVKDLATVFVQVLGNDKASKQVFNIAGDKYVTFDGLARACAKAGGFPEPEIIHYNPKDFDFGKKKPFPFRDQHFFASVDKAKSVLGWEPEFGLVEGLADSYNLDFGRGTFRKEADFSTDDIILGKSLVSV* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0532 377 Pfam NAD dependent epimerase/dehydratase family 55 273 IPR001509 -
Lja1g0532 377 Gene3D - 50 350 - -
Lja1g0532 377 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 52 346 IPR036291 -
Lja1g0532 377 CDD SDR_a1 53 306 - -
Lja1g0532 377 PANTHER UDP-GLUCOSE 4-EPIMERASE 35 372 - -
Lja1g0532 377 PANTHER CHLOROPLAST STEM-LOOP BINDING PROTEIN OF 41 KDA A, CHLOROPLASTIC 35 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0532 Lja-Chr1 4875711 4879745 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0532 - - lja:Lj1g3v4790750.1 746.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0532 1 4875711 4879745 Lja1g0532 1 4875711 4879745 ECH