Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0527 ATGAGTTCAGCACTAGCATTTTCACTGCATCTACTATTTCTATTTCTATGGATTACTTCTTCTTCAGCGGCGGTGATGATGAGTAAATGCGATGTGCCTGCAGTGCTGTTTGTGTTCGGAGATTCCAACTCGGACACGGGTGGACTCACCTCCGGACTCGGTTTCCCCATCAATCTCCCCAACGGCCGCACTTTCTTTCACAGATCCACTGGTCGCTTGTCTGATGGTCGCCTCGTCATAGATCTTCTCTGCCAAAGTTTGAATACAAGATTTTTGACCCCGTACTTGGACTCATTGTCTGGGTCCTCATTCACAAATGGAGCTAACTTCGCAGTGGTGGGGTCCTCTACCCTCCCTAAATATGTTCCTTTCTCTTTGAATATACAGGTTATGCAGTTCCTGCATTTTAAAGCTCGTACCCTTGAACTTGTTTCCGCAGGTGCAAAAAATGTGATCAATGATGAAGGCTTCCGGGCTGCACTCTACTTGATTGATATCGGTCAAAACGACCTTGCTGATTCGTTTGCAAAAAATCTCACATATGTACAAGTCATCAAGAAGATCCCAACTGTTATCACTGAAATTGAAAATGCTGTTAAGAGTTTGTACAACGAAGGCGCCAGAAAATTTTGGGTTCATAATACAGGACCTTTGGGCTGTCTTCCTAAAATACTTGCACTGGCTCAGAAGAAGGATCTGGATTTATTTGGATGTCTTTCCAGTTATAACTCTGCTGCAAGATTGTTTAATGAAGCGCTGTATCATTCGAGTCAGAAACTTAGAACTCGATTGAAGGATGCTACTTTAGTCTATGTTGATATTTACGCCATTAAGCATGACCTCATTGCAAATGCCACCAAATATGGTTTCTCCAATCCTTTGACGGTGTGCTGCGGCTTTGGAGGGCCTCCGTACAATTTTGACTTGAGGGTGACATGCGGTCAACCTGGTTATCAGGTTTGTGATGAAGGATCTCGGTATGTGAATTGGGATGGAACCCATCATACAGAAGCTGCAAATACATTCATAGCTTCTAAGATACTTTCCACTGATTATTCCACACCACGGACACCTTTTGAATTCTTCTGCCACCGCTGA 1098 0.4372 MSSALAFSLHLLFLFLWITSSSAAVMMSKCDVPAVLFVFGDSNSDTGGLTSGLGFPINLPNGRTFFHRSTGRLSDGRLVIDLLCQSLNTRFLTPYLDSLSGSSFTNGANFAVVGSSTLPKYVPFSLNIQVMQFLHFKARTLELVSAGAKNVINDEGFRAALYLIDIGQNDLADSFAKNLTYVQVIKKIPTVITEIENAVKSLYNEGARKFWVHNTGPLGCLPKILALAQKKDLDLFGCLSSYNSAARLFNEALYHSSQKLRTRLKDATLVYVDIYAIKHDLIANATKYGFSNPLTVCCGFGGPPYNFDLRVTCGQPGYQVCDEGSRYVNWDGTHHTEAANTFIASKILSTDYSTPRTPFEFFCHR* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0527 365 PANTHER OS01G0329900 PROTEIN 13 364 - -
Lja1g0527 365 Pfam GDSL-like Lipase/Acylhydrolase 36 347 IPR001087 GO:0016788
Lja1g0527 365 SUPERFAMILY SGNH hydrolase 36 349 - -
Lja1g0527 365 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 13 364 - -
Lja1g0527 365 CDD SGNH_plant_lipase_like 33 351 IPR035669 -
Lja1g0527 365 Gene3D SGNH hydrolase 26 351 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0527 Lja-Chr1 4835971 4839891 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0527 32 347 Acyl Lipid Metabolism Gene Families AT4G10950 27.711 4.69e-31 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0527 - - gmx:100797617 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0527 1 4835971 4839891 Lja1g0527 1 4835971 4839891 ECH