Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0526 ATGTCACTCTCTCTCTCTTCAACTTCGTTTCAATTCTCATGCTCGAGAACCACACATCCTTGCTCAATCACGGGTGCTGCATCAAGCACCTTTCATTCAGTAACTGGCGGTGGTGGTGGTCGTAGTAGTCTTGTACTGAACGTTGGAGGTTCCACCTTGTGTCGAAGATTTCGCGGTTTCAAACTCTGGATACTTGAAACCCTCAACGTTCAACCAACGAAGAGTACAAACCGCTTCAAGAATAGTCTCGAAACTGGAAAGGGGGTGCCAATTCTTCGTGATGATAATAAGGGAACTGGTGTTAGCATTGAGGCTTCATCTTTGCTGCAAACAAGTTCCTCAACTTCTGCCATGGATGTTGGTGGAGCACCCTCACTTTGCATTGCTGTCATAGGAGCCACTGGTGAGCTTGCAAGGAGGAAGATTTTTCCTGCTTTATTTGCCTTGTACTACACTGGCTTTCTTCCTGAGAATGTTGGAATTTTTGGGTATTCAAGGAAGAATATAACTGATGAAGACCTGCGGTCTATTGTAGCTTCAACATTAACATGCCGGGTTGACCATCAAGAAGATTGTGGGGACAAAATAGATGCTTTCCTTGGTAGAACATACTATGTTAATGGAGGCCACGACAACACATATGGGATGTCCATGCTGAATGCCAGAATGGAGCAAATTGAGGGAAGCTCCAAAACCAACCGGATATTCTACCTTTCTGTGCCGCAAGAAGCACTTTTGGATGTTGCTTCATCTCTTGCAAGCAGTGCCCAGACCCAAAAGGGATGGAATCGTGTAATAATTGAGAAGCCATTTGGTTTTGATGCAGTCTCTTCCCAAAGGCTGACACGATATCTTCTTTCGAAGTTTGAGGAAAAGCAAATATATAGGATTGATCATCTTCTAGGAAGGAATCTCATTGAAAACCTCACAGTTTTAAGGTTTGCAAATCTAGTTTTTGAGCCACTGTGGAGCCGTACTTACATACATAATGTACAGGTCATTTTATCTGAAGACTTGGCTGTACATCCAGGAAGGTATTTCGGTGGCTATGGGATTATCCGAGATATTGTTCACAGTCATGTGCTCCAAACAATTGCATTGCTTGCCATGGAACCACCAGTTAGCCTTGATGGAGAAGATATTCGAAATGAAAAGGTTAAGGTTCTGAGATCAATTCGCGAATTAGAACCTAAGGATGTCATTCTTGGCCAGTATAAAGCAAGTAGCGGAGACAAGGTTGATGCATGCATAAATGGTCTGACACCTACTTATTTTGCTGCTGCACTATACATCGACAATGCACGATGGGATGGTGTGCCATTTTTGGTTAAAACAGGCTTGGGACTCATCAAACACCAAATGGAGATACGGATTCAATTTCGTCATGTTCCAGGAAATGTTTACCATGAATGCATCGGGCACAACATTGACCGGGCCACCAATGAGCTCATTCTCCGTGATGTTCCTGATGAGGCTATTCTGGTGAAAATAAACAACAAGGTTCCAGGATTAGGCCTACAACTGGACTCTTCAGAATTAAATTTGCTTTACAAGGACAAGTACAATGTTGAGGTGCCGGATTCATATGAGCATCTTCTGCTTGATGTCATTGATGGGGATAACCATCTTTTCATGAGAAGCGATGAGCTGGCAGCAGCGTGGAACATTCTAACTCCAATTCTGAATGAGATAGACAAGGACAATGTATCAGTGGAACTTTATGAGTTAGGAGGTCGTGGTCCAGTTGGTGCATACTATCTTTGGGCAAAACATGGTATCCGTTGGGTAGAGGACTAG 1797 0.4341 MSLSLSSTSFQFSCSRTTHPCSITGAASSTFHSVTGGGGGRSSLVLNVGGSTLCRRFRGFKLWILETLNVQPTKSTNRFKNSLETGKGVPILRDDNKGTGVSIEASSLLQTSSSTSAMDVGGAPSLCIAVIGATGELARRKIFPALFALYYTGFLPENVGIFGYSRKNITDEDLRSIVASTLTCRVDHQEDCGDKIDAFLGRTYYVNGGHDNTYGMSMLNARMEQIEGSSKTNRIFYLSVPQEALLDVASSLASSAQTQKGWNRVIIEKPFGFDAVSSQRLTRYLLSKFEEKQIYRIDHLLGRNLIENLTVLRFANLVFEPLWSRTYIHNVQVILSEDLAVHPGRYFGGYGIIRDIVHSHVLQTIALLAMEPPVSLDGEDIRNEKVKVLRSIRELEPKDVILGQYKASSGDKVDACINGLTPTYFAAALYIDNARWDGVPFLVKTGLGLIKHQMEIRIQFRHVPGNVYHECIGHNIDRATNELILRDVPDEAILVKINNKVPGLGLQLDSSELNLLYKDKYNVEVPDSYEHLLLDVIDGDNHLFMRSDELAAAWNILTPILNEIDKDNVSVELYELGGRGPVGAYYLWAKHGIRWVED* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0526 598 Hamap Glucose-6-phosphate 1-dehydrogenase [zwf]. 125 597 IPR001282 GO:0006006|GO:0016614|GO:0050661
Lja1g0526 598 PANTHER GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE G6PD 104 598 IPR001282 GO:0006006|GO:0016614|GO:0050661
Lja1g0526 598 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 298 596 - -
Lja1g0526 598 TIGRFAM zwf: glucose-6-phosphate dehydrogenase 126 596 IPR001282 GO:0006006|GO:0016614|GO:0050661
Lja1g0526 598 Gene3D - 123 296 - -
Lja1g0526 598 PRINTS Glucose-6-phosphate dehydrogenase signature 339 356 IPR001282 GO:0006006|GO:0016614|GO:0050661
Lja1g0526 598 PRINTS Glucose-6-phosphate dehydrogenase signature 357 373 IPR001282 GO:0006006|GO:0016614|GO:0050661
Lja1g0526 598 PRINTS Glucose-6-phosphate dehydrogenase signature 288 316 IPR001282 GO:0006006|GO:0016614|GO:0050661
Lja1g0526 598 PRINTS Glucose-6-phosphate dehydrogenase signature 435 461 IPR001282 GO:0006006|GO:0016614|GO:0050661
Lja1g0526 598 PRINTS Glucose-6-phosphate dehydrogenase signature 264 277 IPR001282 GO:0006006|GO:0016614|GO:0050661
Lja1g0526 598 PANTHER INACTIVE GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE 4, CHLOROPLASTIC 104 598 - -
Lja1g0526 598 Gene3D Dihydrodipicolinate Reductase; domain 2 297 597 - -
Lja1g0526 598 Pfam Glucose-6-phosphate dehydrogenase, NAD binding domain 130 308 IPR022674 GO:0006006|GO:0016614|GO:0050661
Lja1g0526 598 Pfam Glucose-6-phosphate dehydrogenase, C-terminal domain 311 595 IPR022675 GO:0004345|GO:0006006|GO:0050661
Lja1g0526 598 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 122 311 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0526 Lja-Chr1 4829933 4834263 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0526 K00036 - gmx:100796541 955.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0526 1 4829933 4834263 Lja1g0526 1 4829933 4834263 ECH