Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0523 ATGGGGTTCCAAAACTTGGTTTTAACATTTTTTATGGTAGCATTAGTTGTTGGCCAATATGGAGATTGTAGAGGCATTAGCAATCACTCACCCAATAAAAAACTTCATGGTGGTTTCGTTCAAAGAAGTGGCACTCATTTTCTCTTGAATGGGAGGCCACACTACATAAACGGCTTCAATTCCTATTGGTTAATGTATGTAGCATCTGAACCTTCTACAATGTCCAAAGTCACCACAACTTTTCAAGATGCTTCCCAGCATGGTTTGAATGTAGCAAGAACATGGGCCTTCAATGATGGAGCTGGTTATAAAGCCCTCCAAACTTCCCCTGGTTCTTATGATGAGAGTGTCTTCAAGGCATTGGATTTTGTGGTATCAGAAGCAGGGAAATATGGAGTGAAACTGATACTGAGCTTAGTGAATAATTGGAAGGATTATGGTGGAAAATATCAATATTTGCAATGGGCAAGAGAACGAGGCCAATCAGTGAACAGTGATGATGATTTCTTCACAAACCCCGTTATTAAACAATATTACAAAAACCATGTCAAGGCTGTGCTAACGAGAAAGAATACTATAACTGGATTGACGTATAAGGACGACCCAACCATTTTCGCATGGGAGCTTATTAATGAACCTCGCTCCGTATCAGACAATTCTGGAAAAACACTTCAGGATTGGGTGAGTGAGATGGCTGTGTATGTGAAATCCATTGACCCAAACCATTTACTAGAGGTTGGGCTTGAAGGATTCTATGGTGAATCAATGCCAGAAAAGAAGCAGTTCAACCCTGGATACCAAGTTGGAACTGATTTCATTACCAACAACCAAGTTCCCCAAATCGATTTTGCCACCATCCATCTCTACCCTGAAACATGGGAAGAGAAGTCAGATGAAGCCGGCCGAAATGCGTTTGTTGAAGAATGGGTCCAGGCCCATATTCAAGACTCAAATGATGTTCTTAAAAAGCCCATTCTTATTACCGAGTTTGGAAAGTCTTCAAATACTCCAGGATATACAGCGGATATGAGAAACAATTACTTTCAGAAAATGTACAATTTCATATACAATAGTGCTAGCAATGGAGGGGCATGTGCTGGTGGGCTTTTTTGGCAGGTCATGGGCCAAGGTGTCAGTGGGCTCGGTGATGGGTATGAAGTTATTTTCGAGGAGGTTCCTCCTTCAACGGCTAGTGTCATCACACAACAATCTCAAAGGATGGCAAATATTAAATAG 1236 0.4126 MGFQNLVLTFFMVALVVGQYGDCRGISNHSPNKKLHGGFVQRSGTHFLLNGRPHYINGFNSYWLMYVASEPSTMSKVTTTFQDASQHGLNVARTWAFNDGAGYKALQTSPGSYDESVFKALDFVVSEAGKYGVKLILSLVNNWKDYGGKYQYLQWARERGQSVNSDDDFFTNPVIKQYYKNHVKAVLTRKNTITGLTYKDDPTIFAWELINEPRSVSDNSGKTLQDWVSEMAVYVKSIDPNHLLEVGLEGFYGESMPEKKQFNPGYQVGTDFITNNQVPQIDFATIHLYPETWEEKSDEAGRNAFVEEWVQAHIQDSNDVLKKPILITEFGKSSNTPGYTADMRNNYFQKMYNFIYNSASNGGACAGGLFWQVMGQGVSGLGDGYEVIFEEVPPSTASVITQQSQRMANIK* 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0523 411 PANTHER - 10 410 IPR045053 GO:0004553
Lja1g0523 411 Gene3D Glycosidases 36 411 - -
Lja1g0523 411 SUPERFAMILY (Trans)glycosidases 39 390 IPR017853 -
Lja1g0523 411 Pfam Cellulase (glycosyl hydrolase family 5) 72 355 IPR001547 GO:0004553|GO:0071704
Lja1g0523 411 PANTHER MANNAN ENDO-1,4-BETA-MANNOSIDASE 1 10 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0523 Lja-Chr1 4762826 4764921 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0523 26 411 Glycoside Hydrolase AT1G02310 55.102 1.73e-159 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0523 K19355 - gmx:100791612 628.632