Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0521 ATGGCGAGGAAGAAGATCAGAGAGTACCACTCCAAGAAGCTCCTCAAAGAGCACCTCAAACGCCTCGCCTCCATCGACCTTGACATCAAATCCGCTCAGGTCACTGAATCAACGGATTTTGCTGAGTTGACTAACCAGCATCCATGGCTTTCATCCACCAAACTGGTTGTCAAGCCAGACATGCTGTTCGGGAAGCGTGGGAAAAGTGGCTTAGTAGCTCTCAATTTAGATGTTGCCCAAGTTGCTGAATTTGTCAAAGAACGCCTTGGCGTTGAGGTTGAGATGGGTGGTTGCAAAGCACCTATAACTACGTTTATTGTTGAGCCCTTTGTTCCTCATGAGCTAGAGTTTTATCTGTCTGTTGTTTCTGAAAGGTTGGGCTCTACCATCAGCTTCTCAGAATGTGGGGGCATAGAAATTGAAGAGAACTGGGATAAGGTTAAAACTATATTCCTTCCAACAGAGAAACCTATGACTTTGGAGGCATGTGCGCCCTTGATTGCTACTCTTCCCTTGGAGGTTCGGGGGAAAATTGGCGATTTCATAATGGGTGTGTTTGCTGTCTTTCAAGATCTGGACTTCAGTTTTCTAGAGATGAATCCATTTACACTAGTGGATGAGAAGCCATATCCACTGGACATGAGAGGGGAATTGGATGACACGGCTGCATTCAAAAACTTCAACAAGTGGGGTGATATAGAGTTTCCATTGCCTTTTGGAAGAGTTCTAAGCCCTACAGAAAGCTTCATTCATTCCTTGGATGACAAGACAAGTGCATCTTTGAAATTTACTGTATTGAATCCAAAAGGACGCATCTGGACAATGGTGGCTGGAGGTGGTGCAAGTGTAATTTATGCTGATACTGTTGGAGATTTAGGCTATGCATCCGAGCTTGGCAACTATGCTGAGTATAGTGGAGCTCCAAATGAGGAGGAAGTGTTGCAGTATGCAAGAGTCGTAATAGATTGTGCTACTGCAGATCCTGATGGCCGTAAAAGAGCCCTTCTTATTGGAGGTGGCATCGCAAACTTCACTGATGTTGCTGCCACATTCAGTGGGATTATTCGAGCCCTGAAAGAGAAGGAATCAAAGCTTAAAGCAGCAAGAATGCACATCTTTGTCAGAAGAGGTGGTCCAAATTATCAGACTGGTTTGGCAAAGATGCGTGCATTGGGGGAGGAATTGGGAGTACCAATTGAGGTTTATGGGCCGGAGGCCACAATGACTGGCATCTGCAAGCAAGCTATTGATTGCATCATGTCTGAAGCATAG 1272 0.4528 MARKKIREYHSKKLLKEHLKRLASIDLDIKSAQVTESTDFAELTNQHPWLSSTKLVVKPDMLFGKRGKSGLVALNLDVAQVAEFVKERLGVEVEMGGCKAPITTFIVEPFVPHELEFYLSVVSERLGSTISFSECGGIEIEENWDKVKTIFLPTEKPMTLEACAPLIATLPLEVRGKIGDFIMGVFAVFQDLDFSFLEMNPFTLVDEKPYPLDMRGELDDTAAFKNFNKWGDIEFPLPFGRVLSPTESFIHSLDDKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVAATFSGIIRALKEKESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGVPIEVYGPEATMTGICKQAIDCIMSEA* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0521 423 PANTHER ATP-CITRATE SYNTHASE 1 423 - -
Lja1g0521 423 Pfam ATP citrate lyase citrate-binding 241 417 IPR032263 -
Lja1g0521 423 Gene3D - 1 233 - -
Lja1g0521 423 Gene3D - 240 422 IPR016102 -
Lja1g0521 423 PANTHER ATP-CITRATE SYNTHASE ALPHA CHAIN PROTEIN 3 1 423 - -
Lja1g0521 423 SUPERFAMILY Succinyl-CoA synthetase domains 259 403 IPR016102 -
Lja1g0521 423 Pfam ATP-grasp domain 6 203 IPR013650 -
Lja1g0521 423 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 4 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0521 Lja-Chr1 4736594 4741321 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0521 1 420 Acyl Lipid Metabolism Gene Families AT1G09430 89.286 0.0 785
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0521 K01648 - gmx:100787551 798.505
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0521 1 4736594 4741321 Lja1g0521 1 4736594 4741321 ECH