Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0513 ATGGCTTCCACTCACAACCACAACAACAACAACAACGGCTGCACCACCCACATCCCCAAAAAGCCAAAGCTCTCACCTCTATCCTCCTCCCCCTTCATCACCCCTTCTGAGATTCAATCCGAATTCTCCCACCACGATCCCTCCGTTGCTCGAATCAACAACGGCAGCTTCGGCTGCTGCTCCGCCTCCGTCACCGCCGCCCAACACGACTGGCAGCTCAAGTACCTCCGCCAGCCTGACAACTTCTACTTCAACCACCTCAAACAAGGCATCCTCCGCTCCCGCACCATCATCAAAGACCTCGTCAACGCCGACCACCTCGACGAGATCTCCATCGTCGATAACGCCACCACCGCCGCCGCCATCGTCCTCCAGAACACTGCCTGGGCCTTCCGCGAGGGCACCTTCCAGCCTGGCGATGTCGTTCTCATGCTCCACTACGCCTATGGTGCTGTCAAGAAATCCATGGAGGCCTACGTCACGCGCGCCGGCGGCACCGTCATCGAGGTCCCTCTTCCGTTCCCGGTGAAATCCTCCGATGACATCGTCCGCGAGTTCCGCAGCGCGCTGGAGAGAGGGAAGAGCGGCGGCAAGAAGGTCAGGCTCGCCGTCATCGATCACGTGACATCTATGCCCTGTGTCGTGATTCCGGTCAAGGAATTGGTCAAGATTTGCAGGGAAGAAGGGGTTGACCGGGTTTTTGTTGATGCTGCACATTCCATTGGGTGCACCGATGTTGATATGAAAGAGATTGGTGCTGATTTCTACACCAGCAATTTGCACAAGTGGTTCTTTTGTCCACCTTCAATTGCCTTTTTGTACAGTCGCAAGCACCCTAAAGGTGGTTCAGGTTCTGAATTACACCACCCTGTGGTGTCTCATGAGTATGGTAATGGGTTAGCTGTGGAAAGTGCTTGGATTGGGACCAGAGACTACAGTGCCCAATTGGTGGTTCCTGCAGTTATAGACTTTGTGAACAGGTTTGAAGGAGGAATTGAAGGGATCAAGAAGAGGAACCATGAAACTGTTGTGGAGATGGGAGATATGCTGGTTAAGGCTTGGGGGACTCATGTGGGGTGTCCTCCTCACATGTGTGCAAGCATGGTCATGGTGGGTTTGCCAACTTGTTTGGGGGTTCAAAGTGATTCTGATGCTCTCAAGTTGAGGACACATTTGAGGGAGGCTTTTGGGGTTGAAGTTCCCATTTATTACCGGCCACCAAGAGATGGAGAAGTTGAGCCTGTAACTGGGTATGCAAGGATTTCTCATCAAGTCTACAACAAAGTTGATGACTATTACAAGTTTAGGGATGCAGTTATCCAGCTTGTGGATAAGGGTTTTACTTGTGCTCTTCTTTCGGATTGA 1365 0.5231 MASTHNHNNNNNGCTTHIPKKPKLSPLSSSPFITPSEIQSEFSHHDPSVARINNGSFGCCSASVTAAQHDWQLKYLRQPDNFYFNHLKQGILRSRTIIKDLVNADHLDEISIVDNATTAAAIVLQNTAWAFREGTFQPGDVVLMLHYAYGAVKKSMEAYVTRAGGTVIEVPLPFPVKSSDDIVREFRSALERGKSGGKKVRLAVIDHVTSMPCVVIPVKELVKICREEGVDRVFVDAAHSIGCTDVDMKEIGADFYTSNLHKWFFCPPSIAFLYSRKHPKGGSGSELHHPVVSHEYGNGLAVESAWIGTRDYSAQLVVPAVIDFVNRFEGGIEGIKKRNHETVVEMGDMLVKAWGTHVGCPPHMCASMVMVGLPTCLGVQSDSDALKLRTHLREAFGVEVPIYYRPPRDGEVEPVTGYARISHQVYNKVDDYYKFRDAVIQLVDKGFTCALLSD* 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0513 454 PANTHER ISOPENICILLIN N EPIMERASE-LIKE PROTEIN 10 453 - -
Lja1g0513 454 PANTHER L-CYSTEINE DESULFHYDRASE 10 453 - -
Lja1g0513 454 MobiDBLite consensus disorder prediction 1 30 - -
Lja1g0513 454 Pfam Aminotransferase class-V 88 359 IPR000192 -
Lja1g0513 454 SUPERFAMILY PLP-dependent transferases 42 444 IPR015424 -
Lja1g0513 454 Gene3D - 77 325 IPR015421 GO:0003824
Lja1g0513 454 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0513 Lja-Chr1 4648377 4651596 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0513 K22207 - gmx:100786129 748.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0513 1 4648377 4651596 Lja1g0513 1 4648377 4651596 ECH