Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0492 ATGCTGCGTCTGAAAGCTTTCCGGCCTTCGAATGACAAAATCGTTAAGATCCAGTTGCATCCCACGCATCCGTGGATGGTAACTGCGGATGATTCAGATCGAGTCTCTGTTTGGAATTGGGAACACCGCCAGGTCATATATGAGTTGAAAGCTGGCGGAGTCGATGAGCGGCGTTTGGTCGGTGCCAAATTGGAGAAGCTAGCTGAAGGAGAAACAGAGTCTAGAGGGAAACCCACAGAAGCCATTCGAGGAGGAAGTGTTAAGCAGGTAAAGTTTTTTGATGATGATGTACGCTTTTGGCAACTTTGGCATAATCGGTCTGCAGCTGCAGAGGCTCCGACCGCTGTCCATACTTCAGCTTTCAGTTCTCCTGCCGCATCAACAAAAGGGAGGCATTTTCTTGTCATATGTTGTTTAAACAAAGCTATATTTTTGGACTTGGTGACAATGCGAGGCCGTGATGTACCAAAGCAAGAGCTTGATAACAAGTCCCTTCATTGCATGGAGTTCCTTTATAGATCCGGCTCTAGCGATGGTCCTCTTGTTGCTTTTGGTGCATCTGATGGAGTCATTAGAGTTCTCTCAATGATGACATGGAAGCTCGTGCGAAGGTACACTGGAGGTCATAAAGGAACAATCTCTTGCTTGATGTCCTTCATGGCTGCTTCTGGCGAGGCTCTTCTGGTTTCAGGGGCTAGTGATGGATTGCTCATACTTTGGAGTGCCGATCATGGTCAAGATTCACGTGAACTTGTGCCCAAGCTTAGTTTAAAGGCTCATGATGGCGGGGTTGTGGCAGTAGAGCTGTCTAGGGTGATGGGAGGTACTCCTCAGCTAATTACAATTGGTGCAGATAAGACATTAGCCATATGGGACACAGTCTCCTTTAAGGAACTGCGGCGTATAAAGCCAGTTCCAAAATTGGCTTGTCACAGTGTGGCTTCTTGGTGCCATCCTCGAGCTCCAAACCTTGATATTCTAACCTGTGTCAAAGATTCTCACATTTGGGCGATCGAACATCCCACTTATTCTGCTCTCACAAGGCCATTGTGTGAATTGACCACAGTTATTCCTCCACAAGCCCTTGCTCCCAGTAAGAAACTGAGGGTGTATTGTATGGTAGCACATACCTTGCAGCCACATCTTGTTGCTACTGGAACCAATATTGGTGTTATTATCTGCGAGTTTGATTCAAGATCTCTTCCACCTGTAGCACCCCTACCAACCCCATCAGATAGTAGAGAGCATTCTGCCGTATTTGTAATTGAAAGGGAACTAAAGCTATTAAATTTTCAGTTAAACAACTCTGCAAATCCATCTCTTGGAAATAACAGCTCCTTGTCAGAAACTGGAAGACCTAAGGCAGATTTTTTTGAACCATTACCTGTCAAGCAGGGGAAGAAGCACATTAGCACACCTGTTCCACATGATTCACACTCTGTTCTTTCTGTGAGCAATTCAGGAAAGTATTTATCGGTCGTTTGGCCAGATATACCTTACTTCTCTGTCTACAAGGCCAGTGATTGGTCGATTGTTGACTCCGGCAGTGCAAGACTTCTTGCTTGGGATACATGTCGTGATAGATTTGCTATATTGGAATCAGCAATAACTCCTAGAATTCCTATAATTCCCAAGGGTAGTTCATCAAAGAGAGCAAAAGAAGCTGCTGCAGCACAAGCAGCAGCCGCTGCTGCTGCTGCTGGTACAGCTTCTGTTCAAGTCCGCATCTTGTTAGATGATGGAACGTCAAATATACTAATGAGGTCTGTTGGTGCACGCAGTGAACCAGTCATTGGTTTGCATGGAGGGGCACTGCTTGGTATTGCCTATCGAACATCTAGGAGAATCAGTCCTATTGCGGCCACTGCCATTTCAACAATCCAATCTATGCCCTTATCAGGTTATGGAAGCAGTGGTCTTTCTTCTTTTACTACTTATGATGATGGATTTTCTTCTCATCGATCTCCAGCTGAGGCGGCACCTCAAAATTTCCAGCTATACAGTTGGGAGACATTTCAACCTGTGGGGGGTTTACTTCCTCAGCCAGAATGGACTGCTTGGGACCAAACTGTCGAATACTGTGCATTTGCGTACCAACAGTACATAGTCATATCTTCTTTGCGCCCACAATTTAGATACCTGGGAGATGTTGCAATCCCTTATGCTACTAGTGGTGTTTGGCACCGGAGGCAGCTGTTTGTGGCAACACCAACTACTATAGAAATTGTCTTTGTGGACGCTGGGGTTGCACAAATTGACATTGAAACTAAGAAGATGAAAGAAGAGCAAAAATTGAAAGAAGCACAGTCAAGAGCAGTCGCAGAGCATGGAGAATTAGCACTAATTACAGTAGAAGGTCCACAATCTACTACAGAAGAAAGAATATCATTGAGGCCACCTATGCTACAGGTGGTTCGATTGGCTTCATTTCAGCATGCTCCTTCAGTACCACCTTTCTTAACATCACCAAAACAATCTAGAGTTGATGGTGATGACTCATGGATGGCAAAAGAAGCAGAAGAGAGAAAGGCAAGTGAGGTGGCTGTTGGTGGTGGGGGTGTGTCTGTGGCAGTTACTCGTTTCCCAATGGAACAGAAACGTCCAGTTGGGCCTCTTGTTGTGGTAGGTGTAAGAGATGGAGTTCTTTGGCTGATTGACAGGTACATGCGTGCTCATGCCTTATCCTTGAGTCATCCTGGTATTCGTTGCCGATGTCTTGCTGCTTATGGTGATGCTGTTAGTGCAGTAAAATGGGCAAGTAGGCTTGGAAGAGAACACCATGATGATTTAGCACAATTTATGCTGGGAATGGGCTATGCTACTGAAGCACTTCATTTGCCTGGAATATCTAAGAGGTTGGAGTTTGATTTGGCAATGAAGAGCAATGATTTGAAGAGAGCTCTTCACTGTCTTCTTACCATGAGTAACAGCAGAGATATAGGACGTGATGGTACTGGGCTTGGTTTGAATGACATTCTAAATTTATCAGATAAAAAAGAAGATATTGCTGAAGGTTTTCAGGGTATAGTAAAGTTCGCAAAAGAGTTCTTGGATCTTATCGACGCTGCAGATGCTACAGCTCAGGGTGAAATTGCTCGTGAAGCTCTCAAAAGGTTAGCTGCAGCTGGTTCAGTGAAAGGTGCTTTACAAGGTCACGAATTGAGGGGATTAGCGTTGCGCCTTGCAAATCATGGAGAGTTGACCAGGCTAAGTGGTTTGATAAACAACTTAGTCACACTTGGGTTGGGACGAGAAGCTGCATTTGCTGCTGCTGTTTTGGGTGACAATGCTCTAATGGAGAAAGCATGGCAGGATACTGGAATGCTGGCAGAGGCTGTGCTTCATGCTCATGCACACGGACGTCCAACTTTGAAGAACTTGGTTCAGGCCTGGAACCAAGTACTACAGAGAGAGATTGAGCCCACTCCAACACAAAAGACAGATGCTGCTGCTGCTTTTCTAGCTTCTCTTGAGGAGCCTAAGCTTACGAGTTTGGCAGATGCAGGGAAGAAACCGCCTATCGAAATCCTACCCCCGGGGATGATGTCTCTCAACGCTCCTATCTCCATCCAGAAAAAACCAGCTTCTGCTGCTCAGACATCCCAACAACCAGCAGGCAAGCCATTGGCGATAGAAGCACCTCCTACAACCACAGCAGCGCCCGAGAGTGCTACACCACAGCCTGAATCTGGGCCTGCACCAGCTAGTGATCCACTCAAGTCAGAGTCTGCCTCAGACTCAACACCAGTTCCAGCAGCTACTCCACCTCAACCAGAATCAGGTGAAACCACCGCAGAAAATGGAGATCCTACCACTACTAAACCGGGAAGTGATGAAAATCCAAATGTTAATGGGGAAAATCCAACTGTTCAAGCAGAGCCTACGACCGGTCCAGCACCTCCTGAGGTCCCATCACCAGCTGCAGAAGTTACAGAGACTAATGCTCCAAGTCCAACAACAGTGCCTGTGAGTGAGCCCCTCGTATGA 3987 0.4623 MLRLKAFRPSNDKIVKIQLHPTHPWMVTADDSDRVSVWNWEHRQVIYELKAGGVDERRLVGAKLEKLAEGETESRGKPTEAIRGGSVKQVKFFDDDVRFWQLWHNRSAAAEAPTAVHTSAFSSPAASTKGRHFLVICCLNKAIFLDLVTMRGRDVPKQELDNKSLHCMEFLYRSGSSDGPLVAFGASDGVIRVLSMMTWKLVRRYTGGHKGTISCLMSFMAASGEALLVSGASDGLLILWSADHGQDSRELVPKLSLKAHDGGVVAVELSRVMGGTPQLITIGADKTLAIWDTVSFKELRRIKPVPKLACHSVASWCHPRAPNLDILTCVKDSHIWAIEHPTYSALTRPLCELTTVIPPQALAPSKKLRVYCMVAHTLQPHLVATGTNIGVIICEFDSRSLPPVAPLPTPSDSREHSAVFVIERELKLLNFQLNNSANPSLGNNSSLSETGRPKADFFEPLPVKQGKKHISTPVPHDSHSVLSVSNSGKYLSVVWPDIPYFSVYKASDWSIVDSGSARLLAWDTCRDRFAILESAITPRIPIIPKGSSSKRAKEAAAAQAAAAAAAAGTASVQVRILLDDGTSNILMRSVGARSEPVIGLHGGALLGIAYRTSRRISPIAATAISTIQSMPLSGYGSSGLSSFTTYDDGFSSHRSPAEAAPQNFQLYSWETFQPVGGLLPQPEWTAWDQTVEYCAFAYQQYIVISSLRPQFRYLGDVAIPYATSGVWHRRQLFVATPTTIEIVFVDAGVAQIDIETKKMKEEQKLKEAQSRAVAEHGELALITVEGPQSTTEERISLRPPMLQVVRLASFQHAPSVPPFLTSPKQSRVDGDDSWMAKEAEERKASEVAVGGGGVSVAVTRFPMEQKRPVGPLVVVGVRDGVLWLIDRYMRAHALSLSHPGIRCRCLAAYGDAVSAVKWASRLGREHHDDLAQFMLGMGYATEALHLPGISKRLEFDLAMKSNDLKRALHCLLTMSNSRDIGRDGTGLGLNDILNLSDKKEDIAEGFQGIVKFAKEFLDLIDAADATAQGEIAREALKRLAAAGSVKGALQGHELRGLALRLANHGELTRLSGLINNLVTLGLGREAAFAAAVLGDNALMEKAWQDTGMLAEAVLHAHAHGRPTLKNLVQAWNQVLQREIEPTPTQKTDAAAAFLASLEEPKLTSLADAGKKPPIEILPPGMMSLNAPISIQKKPASAAQTSQQPAGKPLAIEAPPTTTAAPESATPQPESGPAPASDPLKSESASDSTPVPAATPPQPESGETTAENGDPTTTKPGSDENPNVNGENPTVQAEPTTGPAPPEVPSPAAEVTETNAPSPTTVPVSEPLV* 1329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0492 1328 MobiDBLite consensus disorder prediction 1257 1293 - -
Lja1g0492 1328 Coils Coil 751 771 - -
Lja1g0492 1328 MobiDBLite consensus disorder prediction 1191 1328 - -
Lja1g0492 1328 Gene3D - 3 350 IPR015943 GO:0005515
Lja1g0492 1328 SUPERFAMILY WD40 repeat-like 5 308 IPR036322 GO:0005515
Lja1g0492 1328 Gene3D - 904 1151 - -
Lja1g0492 1328 PANTHER TSET COMPLEX MEMBER TSTF 1 1260 - -
Lja1g0492 1328 PANTHER BNAC07G49640D PROTEIN 1 1260 - -
Lja1g0492 1328 ProSiteProfiles Trp-Asp (WD) repeats profile. 257 301 IPR001680 GO:0005515
Lja1g0492 1328 MobiDBLite consensus disorder prediction 1191 1206 - -
Lja1g0492 1328 SMART WD40_4 250 292 IPR001680 GO:0005515
Lja1g0492 1328 SMART WD40_4 1 39 IPR001680 GO:0005515
Lja1g0492 1328 SMART WD40_4 198 241 IPR001680 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0492 - - gmx:100786844 2280.75