Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0491 ATGGCCTCAACTCTTCTTCCCCTCCTCGCTACCTTGTTTCTGGCTTTCTCCGTCTACTATCTCCAGATCGCTGAAGCAGAACCACAACAGCTTTCTACTCTCAAGCTTAACTCTCGTATTCTTCAGGAGTCAATTGCGAAAGAGATTAACGAAAACCCCGGGGCAGGATGGGAGGCTGCTATCAGTCCTCGTTTCTCCAACTACACAGTTGCACAATTTAAGCGCCTTCTTGGAGTGAAACCATCGCCTAAGAAGGAGCTCAGAAGTACACCCGTTGTATCTCATCCGAGATCATTGAAGTTGCCGAAGAGTTTCGATGCAAGGACGGCTTGGTCGCAGTGTAGCACTATTGGAAGAATCCTAGATCAGGGTCACTGTGGTTCTTGTTGGGCATTTGGTGCTGTGGAATCGTTATCAGATCGCTTTTGTATTCATCTTGATGTGAATGTATCTCTTTCTGTTAATGACCTTCTTGCATGCTGTGGCTTTCTCTGTGGGTCTGGCTGTGATGGGGGATATCCTCTATACGCATGGCGATACTTAGCTCACCACGGTGTTGTCACTGAAGAGTGTGACCCATACTTTGATCAAATTGGCTGTTCTCATCCTGGTTGTGAGCCAGCATATCAAACTCCCAAGTGTGTTAGGAAGTGTGTAAAAGGGAACCAGATTTGGAAGAAGTCAAAGCACTTTAGTGTTAATGCATATTCGGTAAAGTCTGATCCCTATGATATCATGGCAGAAGTTTATAAGAATGGGCCTGTTGAAGTCGCATTCACTGTTTATGAGGATTTTGCCCACTACAAATCGGGAGTTTACAAGCACATCACAGGTTCTCAATTAGGTGGTCATGCAGTAAAGCTGATTGGGTGGGGAACAACTGACGAGGGGGAGGACTATTGGCTTATCGCAAATCAATGGAACAGAAGCTGGGGAGATGATGGTTACTTCATGATCAGAAGAGGAACAAATGAATGTGGGATTGAAGAGGATGTTACTGCAGGTTTGCCTTCCACCAAAAATATGGGAAGATGGGTGATGGACATGGATGCTGACGCTGATGTTTCATTCTGA 1074 0.4553 MASTLLPLLATLFLAFSVYYLQIAEAEPQQLSTLKLNSRILQESIAKEINENPGAGWEAAISPRFSNYTVAQFKRLLGVKPSPKKELRSTPVVSHPRSLKLPKSFDARTAWSQCSTIGRILDQGHCGSCWAFGAVESLSDRFCIHLDVNVSLSVNDLLACCGFLCGSGCDGGYPLYAWRYLAHHGVVTEECDPYFDQIGCSHPGCEPAYQTPKCVRKCVKGNQIWKKSKHFSVNAYSVKSDPYDIMAEVYKNGPVEVAFTVYEDFAHYKSGVYKHITGSQLGGHAVKLIGWGTTDEGEDYWLIANQWNRSWGDDGYFMIRRGTNECGIEEDVTAGLPSTKNMGRWVMDMDADADVSF* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0491 357 Pfam Papain family cysteine protease 101 334 IPR000668 GO:0006508|GO:0008234
Lja1g0491 357 PANTHER CATHEPSIN B-LIKE PROTEASE 3 21 343 - -
Lja1g0491 357 SMART pept_c1 101 336 IPR000668 GO:0006508|GO:0008234
Lja1g0491 357 Pfam Peptidase family C1 propeptide 41 82 IPR012599 GO:0004197|GO:0050790
Lja1g0491 357 CDD Peptidase_C1A_CathepsinB 102 335 - -
Lja1g0491 357 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 123 134 IPR000169 -
Lja1g0491 357 SUPERFAMILY Cysteine proteinases 44 337 IPR038765 -
Lja1g0491 357 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 282 292 IPR025660 -
Lja1g0491 357 Gene3D Cysteine proteinases 32 342 - -
Lja1g0491 357 PRINTS Papain cysteine protease (C1) family signature 284 294 IPR000668 GO:0006508|GO:0008234
Lja1g0491 357 PRINTS Papain cysteine protease (C1) family signature 300 306 IPR000668 GO:0006508|GO:0008234
Lja1g0491 357 PRINTS Papain cysteine protease (C1) family signature 123 138 IPR000668 GO:0006508|GO:0008234
Lja1g0491 357 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 21 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0491 Lja-Chr1 4428913 4432629 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0491 K01363 - gmx:100778103 662.914