Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0482 ATGGATTCGAGTGCGAGTGTGAAAGATTTCATAGCAAAGGAAGTGGCTGATTGGGACGACGAATTGGTCACCGTCGCTCGATTCAAGGCATTTTCCGGCCAACGATCCGATTGGCAACCCAACTTCCTCTTCTGGAGAAATTTGATCATCAAAATCGCCACCCATTTTCGCTTCCTCACAGTTCAACCTTCCCAGGTTAAGAATGAGTGGTTCAATCGAGGAGGGTTAACCCCTTTGTGTCTTGACCATGTCCTGTTTCTGATGTATAATGAAGGTGACATCATGAGAACTCTGGACCTTGTGGATCCAAGGAGTGGAAGAGTCTCCCAACTGTTCAGAAAAGTGGGCAGTTTGATAACTAAATCGGCGACGCCGCCGGATATCGTGGCTGAAGAATTTGTGGTTGTAACTGCTGTGCTTAAGGATAAGGCTGCTGAAGTTGTTAAACATCTATCTGAAAATCACTGGAATTCATCTTGTATCATCACGATGAAGAAATTTCAGGATGTATGTGGAGGGCCGGATGAAGCATCTGTAATCTTGAGGTATCTGTCTGGGTGCAGAACAGCGCAGTATCTGTCAGTCCATAAGAAAGAATTTGTAGAGGGGGTAAAAATTTCTCTCTCAACAGCAGTGTTATCCAGTATATCTAATTTAGATTATGATGTACTGTACTTGATTTGGACGACTGAGAAGCTTCAGCAACAACTAGATGTGATTGACAGGCGTTATGAATTGTCAAGAAAATCAGCATTGGCTTCTCTACATTCTGGTAACAAAGAAGTGGCCCTTAGGTATGTAAGGGAGCTAAAGTTGATCACCCAGAGCAGAGAAAAATGTTTATCATTTTTGAACCGAGTAGAGGAGGTACTCAGCATTATTAGTGATGCTGAGTCAACAAAAAAGGTTTCAGAAGCTATGCAGATTGGAGCGCGAGCAATTAAAGAAAATAAGATCAGTGTAGAAGATGTTGATCTTTGTTTAAGAGATCTCGAAGAGAGTATTGATTCCCAGAAGGAAGTTGAAAAGGCACTAGAGCAAACTCCTTCACACGCATATGTTGATGAAGAAGATATTGAAGAGGAATTCAAGAAGCTGGAGCAGGCTTTTGGGGAAGAGGTTCAAGTTCCTGCACCAGAGAAGACGATTGCCAATGCAGAAGGAAGCGACACTTCAGGAGCTGCTGAATTTATCAGTGATGCTTTCTCAAATCTCAAGCTTTCAGATGGTCCAGCTGAGAGGCCAAGGATCACTCAGGTGTCAGGGTCCAAAAAAACAGCAAATTTAGAAATGTAA 1296 0.4275 MDSSASVKDFIAKEVADWDDELVTVARFKAFSGQRSDWQPNFLFWRNLIIKIATHFRFLTVQPSQVKNEWFNRGGLTPLCLDHVLFLMYNEGDIMRTLDLVDPRSGRVSQLFRKVGSLITKSATPPDIVAEEFVVVTAVLKDKAAEVVKHLSENHWNSSCIITMKKFQDVCGGPDEASVILRYLSGCRTAQYLSVHKKEFVEGVKISLSTAVLSSISNLDYDVLYLIWTTEKLQQQLDVIDRRYELSRKSALASLHSGNKEVALRYVRELKLITQSREKCLSFLNRVEEVLSIISDAESTKKVSEAMQIGARAIKENKISVEDVDLCLRDLEESIDSQKEVEKALEQTPSHAYVDEEDIEEEFKKLEQAFGEEVQVPAPEKTIANAEGSDTSGAAEFISDAFSNLKLSDGPAERPRITQVSGSKKTANLEM* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0482 431 MobiDBLite consensus disorder prediction 408 431 - -
Lja1g0482 431 Pfam Snf7 229 375 IPR005024 GO:0007034
Lja1g0482 431 Gene3D - 228 381 - -
Lja1g0482 431 Coils Coil 328 348 - -
Lja1g0482 431 PANTHER SNF7 FAMILY PROTEIN 101 407 - -
Lja1g0482 431 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 101 407 IPR005024 GO:0007034
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0482 K15053 - gmx:100783674 637.491