Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0470 ATGAGAAATCATGGTAGGTTCATCATGTGCCGCTACCTTTCACGGTGGCGGAAGCAATTCGAATCAAACTCCGATCTCCCACTCCCTAATTTCCGCCACCGTCCTCCGTTTCCCCGTCGTTCTTACTCCGCCGAAGTGCAACCTCAACTGTCTCCTGACCTGTTGAACATTATGGAACAAAGACTCTCTGCAATTGAGCACAGGAGTGCTTGTCTTAGCAATCTTCTGAATCAGCCAGAAGCTACACCTTCAGAGTATGCACGAGCTAATAAGGAGCTGAGGAAGCTGAGTGGCTCTGTTGAACTTATCAATGAATTAAGGGCAAAACAGAAGGAAATTGATGGCTTGAAGACACTAATGGCTGAAAGTTCTGAAGACAAAGACATGCTTAGTATGGCAACAGAGGAGTTTGGCCAAGCCAAAGAGGAAGAAAGAAGATTACAAAATATGCTGCTGAAGTCATTACTTCCTAAAGATGATGCTGATGAAAGGGATTCCATTTTGGAGGTGCGAGCAGGTCAGTATGAGAAGTATGCTCACAAGAATGGATGGAAGTTTGAAGTTGTAGATATAGCTCAATCTGATATGAAAGGATACAAGGAAGCTAGTGCAGCAATTGCAGGAGCTGAAAAGTTGGGACGTGTTCATACCAGTGCTGTTTCTGTAGCAATCCTCCCTCAGGCTGATGAGGTCGATGTTCAATTGAAAAATGAAGACTTAAAAGTCGATACCTATAGATCTGGTGGTTCAGGTGGTCAGCATGCAAATACAACCAACAGTGCTGTTAGAATAACTCACATTCCAACAGGGATTATAGTTGCTATACAAGATGAGCGTTCTCAGCATATGAACAAGGCCAAAGCTCTCAAGATACTGTGTGCGAAGCTATATGAAATGGAAAGGTTGAGACTTCACAGTAATCGATCAAAGCTTCGATCGGAGCAGATTGGTAGTGGGGACAGATCTGAACGCATCCGAACATACAATTTTCCTCAAGGCCGTGTAACTGATCATAGAGTTGGTATCACCTATCACTCAATAGACGATGTAATGCAAGGAGAGAATCTTGATGTCTTCATTGATGCTCTTCTATTGCGAGAAGAAATGGACGCAGTTGCAAGTTTTACTTCTTCTCAGTAA 1140 0.4333 MRNHGRFIMCRYLSRWRKQFESNSDLPLPNFRHRPPFPRRSYSAEVQPQLSPDLLNIMEQRLSAIEHRSACLSNLLNQPEATPSEYARANKELRKLSGSVELINELRAKQKEIDGLKTLMAESSEDKDMLSMATEEFGQAKEEERRLQNMLLKSLLPKDDADERDSILEVRAGQYEKYAHKNGWKFEVVDIAQSDMKGYKEASAAIAGAEKLGRVHTSAVSVAILPQADEVDVQLKNEDLKVDTYRSGGSGGQHANTTNSAVRITHIPTGIIVAIQDERSQHMNKAKALKILCAKLYEMERLRLHSNRSKLRSEQIGSGDRSERIRTYNFPQGRVTDHRVGITYHSIDDVMQGENLDVFIDALLLREEMDAVASFTSSQ* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0470 379 Gene3D - 53 160 - -
Lja1g0470 379 Gene3D - 162 211 - -
Lja1g0470 379 Coils Coil 106 126 - -
Lja1g0470 379 SMART PCRF_a_2 118 210 IPR005139 GO:0006415
Lja1g0470 379 Pfam RF-1 domain 229 339 IPR000352 GO:0003747|GO:0006415
Lja1g0470 379 PANTHER LD18447P 37 377 - -
Lja1g0470 379 Gene3D - 229 302 - -
Lja1g0470 379 PANTHER LD18447P 37 377 - -
Lja1g0470 379 Pfam PCRF domain 66 210 IPR005139 GO:0006415
Lja1g0470 379 SUPERFAMILY Release factor 82 366 IPR045853 -
Lja1g0470 379 Gene3D - 303 379 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0470 Lja-Chr1 4215628 4219831 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0470 K02835 - gmx:100800412 608.601