Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0467 ATGGCACTTGGTGCCATAATAATGAGTAAGCAGCATCTGCTCACCTACATGTACCTTCTAGTTTACATTTCACTTTCATCAGGGGTTATTCTCTATAACAAGTGGGTCCTCTCCACATTGTATTTCAACTTTCCATTTCCAATAACACTCACTATGATCCATATGGCTTTTTCTGGCGCTGTGGCCTTTGTGCTTATCCGGGTTCTCAAGGTTGTATCACCTATTAAGATGACATTACATATATATGCAACTTGTGTGGTCCCTATAAGCGCCTTCTTTGCCGCAAGTCTGTGGTTTGGGAACACTGCCTATTTATTCATTTCTGTCGCCTTCATCCAGATGCTTAAAGCCCTGATGCCTGTGGCAACATTTCTGGTGGCTGTGACTCTTGGAACTGAGAAATTAAGGTGTGACGTGTTCTGGAACATGGTGCTGGTCAGTGTTGGAGTTGTAATTTCCTCCTACGGGGAAATTCATTTTAATGTAATCGGTACAGTTTATCAGGTCACAGGAATAATTGCTGAAGCGTTGAGGCTGGTCTTAACTCAAGTTCTTCTTCAAAAGAAGGGCTTGACACTAAATCCTATTACCAGCTTGTATTACATAGCACCTTGCAGCTTTGTATTTCTTTTTATCCCATGGTATATCCTTGAGAAGCCTGAGATGGAAGATCCGCATATGCAATTTAACTTCTGGATATTTTTCTCAAATGCGCTTTGTGCTTTGGCGTTGAATCTTTCAACTTTCTTAGTGATTGGTAGAACTGGGGCAGTAACTATTCGAGTGGCTGGAGTTTTGAAAGACTGGTTACTTATCACTCTTTCTACTGTCTTATTTCCTGAGTCAAAGATTACAGGGCTTAATATTACTGGCTATGCTATTGCTTTAAGTGGCGTTGTTTTATACAACTACCTGAAGGTCAAAGATGCTCGCACATCTCAACTTCAAAGTACCCAAGATGAATCAACAAAGGAGTTACAGATGGAGAAAAAGGCAGAGGATGATGTGATCAGCAATGAGGAGACATTACAAAATGATTTAGTTTCCGATACTCATTTTGATGAAGAAGCGCCTTTAATCTCTTCGCGGATATCACATCTGGGAAGAAAACCAGCTTAG 1119 0.4075 MALGAIIMSKQHLLTYMYLLVYISLSSGVILYNKWVLSTLYFNFPFPITLTMIHMAFSGAVAFVLIRVLKVVSPIKMTLHIYATCVVPISAFFAASLWFGNTAYLFISVAFIQMLKALMPVATFLVAVTLGTEKLRCDVFWNMVLVSVGVVISSYGEIHFNVIGTVYQVTGIIAEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLFIPWYILEKPEMEDPHMQFNFWIFFSNALCALALNLSTFLVIGRTGAVTIRVAGVLKDWLLITLSTVLFPESKITGLNITGYAIALSGVVLYNYLKVKDARTSQLQSTQDESTKELQMEKKAEDDVISNEETLQNDLVSDTHFDEEAPLISSRISHLGRKPA* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0467 372 Pfam Triose-phosphate Transporter family 17 303 IPR004853 -
Lja1g0467 372 PANTHER SUGAR PHOSPHATE TRANSPORTER DOMAIN-CONTAINING PROTEIN-RELATED 1 353 - -
Lja1g0467 372 PANTHER SOLUTE CARRIER FAMILY 35 1 353 - -
Lja1g0467 372 MobiDBLite consensus disorder prediction 316 350 - -
Lja1g0467 372 MobiDBLite consensus disorder prediction 323 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0467 Lja-Chr1 4156425 4161353 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lja1g0467 5 369 Organic Solute Cotransporters AT3G17430 75.749 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0467 - - gmx:100779373 652.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0467 1 4156425 4161353 Lja1g0467 1 4156425 4161353 ECH