Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0462 ATGGATTCAGCGACCGGAGCAACGGTGGCGGAGGAGGAGCAACACCTAACTGAATGGCGTCTGCACCGTGGCCCCTATCTCGGAGACATCTCAGCTCTCTGTTTTCTCCACCTTCCCAATCACCCTCTTCCTTTCCTCCTCGCCGGATTGGGTTCGGAAATTCTGTTGTACGATTTAGAACTCGGAAAGGTCATCAGATCCTTCTCTGTATTCGAAGGGGTTCGTGTTCACGGAATCACTTCCAGTAGCTTCCAACAAGAGGCACCTGCACCTGTAACTGTAATTGCTGTGTTTGGTGAAACGAGAGTCAAACTATTTAGCTTCGAATTTGACAATGGCAATCCACAGTTGAAGCTGGTTCATTTGTTGCCAAAGTTTGGTCACTGGGTTTTAGATGTTTGCTTCCTCAAGGGTTGTTTACCTCATTCCAATGTGGAGAGTCATTTTCTTGCTGTAGGATGCAGCGACAATTCGGTTCACGTTTGGGACATCCCTAACTCTAATACTGTTCTTAAGGTTCAATCTCCAGTGCGGTGTCTTCTGTACTCGATGCGGTTATGGGGTCACAATCTTGAAGTTCTTCGTATTGCATCTGGTACAATATTTAATGAGATTGTTGTTTGGAAAGTGGCCCCTCAGCGTGATAAATCTTCAAGAACTCAAGAAGACCATGATCATCAGAGCATTTCATCCTCCAATTTCAGCCTACTAAAAGATAAACAGTATGAGGCTGTTCATGTATGGAAGCTTATTGGACATGAAGGTTCAATCTTCCGACTAGCATGGTCATCTTGTGGATCTAAACTGGTCTCTGTCTCTGATGACCGTAGTGCACGTGTCTGGACTTTTCAAATTGAAGGGGAAGATTCATTGTGCCATGATCCCATTGCCCTTGTCTTATTTGGACATAATGCTCGAGTTTGGGACTGCTGTATTTCTGATTACTTTATTGTTACTGTCAGTGAGGATTGTACATGCCGTATATGGGGAGTTGATGGTGAGCAGCTGCAAGTCATTAAGGAGCACATAGGAAGGGGTATATGGAGATGTTTGTACGAACCAAACTCGTCACTTCTTATAACTGCTGGGTTTGACTCTGCTATTAAAGTGCATAGGCCTCATGCTTCTTTGTCCAGGGGCTTGGCAGCAGCACAAGGGTTTCCTGGCAGAACAGAGATGTTTTCCATTGGCATCCCTAATGTGGTAGAACATATTGGATTAATGGACAGCAAGAGTGAATATGTTCGTTGTTTGCGTTTTTCCTGTCAGGATTCTCTTTATGTTGCTACCAACCATGGTTATCTCTACCATGCTAAATTATGTGACACTGGAGGGGCTCAGTGGAATCAACTTGTCCAGGTCAGCAACAGGACACCTATTATCTGTATGGATTTATTGTCCAAGGACTCATTTAAACTGGATTATGGTGCTGAGGATTGGATTGCAATTGGAGATGGTAAAGGAAATATGACAGTTCTTGGAGTTTCTAACGATGGTTGTACTCCTTCAGTTAGATTGAGCTTTACTTGGAAAGCTGAAATAGAGAGACAGCTACTGGGTACATATTGGTGCAAATCTCTGGGATGTAGGTATATCTTCACAGCTGATCCTAGAGGAAGGTTGAAACTCTGGAGGTTGCCTGACCCTTCAGAATCTGATCTTGAGAGCTTCATGAGGTGTAACAGTGTATCACAAATAGCAGAGTTCATATCGAGTTATGGAATGCGGATAATGTGTTTGGATATATGCTTGGAGGAAGAGGTCCTAGCCTGTGGAGATGTACGTGGTAATATGCTTATATTCCCTTTGCTAAAGGATCTGGTGCTGGGCACATCTGTTGCACCAGAAATGAAAATACCTCCAGTAAATCATTTCAAAGGAGTTCATGGAATTTCAAGCGTCTCCAGTATTTTTGTGACTAGGATTGGTTACAATCAAATTGAGATATGCTCTACTGGCGCGGATGGTTGTATATGCTATCTGGAATATGATCGAGAAATGCAGAATTTGCAATTTACAGGGATGAAACAAGTGAAAGAGTTGACTTTGATTGAATATGTTTCTATGGATAACGCTCTTGATACATTATCAGGCAGCTATGCAGCTGGTTTTGCATCTGTAGATTTCATAATATGGAATTTAGTTAATGAGAACATGGTGGTGAAAATTCCATGCGGTGGATGGCGGCGTCCTCATTCCTATTATCTAGGTGATGTCCCAGAGATGAAGAACTGCTTTGCCTATGTCAAGGATGAAATGATACATATACATAGACACTGGCTTCATGATAGAGATAAGAAGATATACCCTCAGAGTTTGCATATGCAATTCCATGGTAGAGAGATACATTCCTTGTGCTTTATTTCTGAAGATATGCTTCTTAGAGATAATTACAAGCATGCCTTAGTTTCCAAATCAAGTTGGATTGCAACTGGATGTGAAGATGGAACTGTGAGGTTGACATGGTACTCCTCTGGTATTGAAAATTGGTCCATGTCAAAATTACTTGGTGAGCATGTTGGAGGATCAGCTGTAAGATCAATTTGTTGTGTGTCAAAACTACACACGTTTTCATCAGATACAACTGATGTACCTAATGGGCGGAGTGAAGTGAATGCTGCTGATAAGGACAAAGATAGTCCGACCTTACTGATATCAGTGGGTGCAAAGCGTGTCATAACTTCTTGGCTACTAAAAACTACGAGTCGGGACAGTAAAAATGATTTCCTAACTGATCATCAGTATAATTCTAAAGGAGTCGATGATAAATTTGTTTCAAGTTTGTCTTCATCAATGACATTCCAGTGGCTTTCCACAGACATGCCAGCCAAATATTCAACTACATACAAATATCCAGAAAATAATGTGAAGAAAGTAGTTGGTGTTGCCGAAAATGTTTCTAATACAAAAACTGATGCTGAACCTGGATCATTGGTTCCGGATAGGGAAATGATGAACTCGACCAGAGATAAGCATGAGGATGACTGGAGATATCTTGCAGTCACTGCTTTTCTTGTTAAATGTGCTGGTTCCAGGATATCTGTCTGTTTTGTTGTCGTTGCTTGTTCAGATGCTACACTTATGTTGCGGGCTTTAATTTTGCCCTTTCGCTTATGGTTTGACATTGCATTACTTGTTCCTCTACCGGCACCTGTTTTATCATTGCAGCATATCATCTTTCCCATATGTAGGGCTTATAAAGAGAAAATCCAAGTTGGAAATGTATATATTGCAATTAGTGGATCTACCGATGGGAGTATTACTTTCTGGGACCTGACTCACAATGTTGAAGCTTTTATGCAGTGGGTTTCAGTTTGTGATGTAGAGAAGTTCTTTGATTGTCAAAAACGACCCCGCACTGGAAGAGGAAGTCAGGGTGGTAGATGGTGGAGATCTTTTAGCAGTGGCTTGTCAAAGAAAAGACCAGATAGTATTCTGGTCACTTCCAAACCCAAAGAGGATATCGATAGCATTAGTGAGGCTCCACATGGGACATCTTCAGTGCCAAATGTTTCTGAAGCCATGCATCCAGATCCCGAGTTAGAATTTAAGACTGATAATTCGTGCATGGAAACATGTGAAATACAGCCTCTAAGCCTGTTGCGAAATATTCACCAATCTGGTGTCAACTGTCTCCATGTTTCAGAGATAAAGGGTTGCCAAAGTACCCATAGTTGTCAAGTTTACAGCGTAGTTAGTGGGGGTGATGATCAAGCACTTCATCATCTCGTAGTTGAATTATCACCTAAATCAATAAACCTAGATAATGGGATTTTGGCCCCAGATATCACACATTTGGTCTCTGTACCTGAATCTAGAAAGAGCATCCATTTCCAAAATCAGAGCAAGAATTATGAGATCAAATTCTTAAATTCTGAAAATTTTCCCTCAGCCCATAGCGCTTCTGTGAAAGGTGTCTGGACAGATGGATCTTGGGTGTTTTCGACAGGGCTTGATCAGCGGGTCAGATGCTGGAACCTTCACCAGCGTAAACTTATTGAACATGCACATCTGATAGTTAGTGTGCCAGAGCCAGAAGCGTTATCTGCTAGGGCTTGTGGCAGGAACCATTATCAGATTGCAGTTGCTGGAAGAGGGATGCAAATAGTTGACTTTTCAGGATCCTGA 4128 0.4193 MDSATGATVAEEEQHLTEWRLHRGPYLGDISALCFLHLPNHPLPFLLAGLGSEILLYDLELGKVIRSFSVFEGVRVHGITSSSFQQEAPAPVTVIAVFGETRVKLFSFEFDNGNPQLKLVHLLPKFGHWVLDVCFLKGCLPHSNVESHFLAVGCSDNSVHVWDIPNSNTVLKVQSPVRCLLYSMRLWGHNLEVLRIASGTIFNEIVVWKVAPQRDKSSRTQEDHDHQSISSSNFSLLKDKQYEAVHVWKLIGHEGSIFRLAWSSCGSKLVSVSDDRSARVWTFQIEGEDSLCHDPIALVLFGHNARVWDCCISDYFIVTVSEDCTCRIWGVDGEQLQVIKEHIGRGIWRCLYEPNSSLLITAGFDSAIKVHRPHASLSRGLAAAQGFPGRTEMFSIGIPNVVEHIGLMDSKSEYVRCLRFSCQDSLYVATNHGYLYHAKLCDTGGAQWNQLVQVSNRTPIICMDLLSKDSFKLDYGAEDWIAIGDGKGNMTVLGVSNDGCTPSVRLSFTWKAEIERQLLGTYWCKSLGCRYIFTADPRGRLKLWRLPDPSESDLESFMRCNSVSQIAEFISSYGMRIMCLDICLEEEVLACGDVRGNMLIFPLLKDLVLGTSVAPEMKIPPVNHFKGVHGISSVSSIFVTRIGYNQIEICSTGADGCICYLEYDREMQNLQFTGMKQVKELTLIEYVSMDNALDTLSGSYAAGFASVDFIIWNLVNENMVVKIPCGGWRRPHSYYLGDVPEMKNCFAYVKDEMIHIHRHWLHDRDKKIYPQSLHMQFHGREIHSLCFISEDMLLRDNYKHALVSKSSWIATGCEDGTVRLTWYSSGIENWSMSKLLGEHVGGSAVRSICCVSKLHTFSSDTTDVPNGRSEVNAADKDKDSPTLLISVGAKRVITSWLLKTTSRDSKNDFLTDHQYNSKGVDDKFVSSLSSSMTFQWLSTDMPAKYSTTYKYPENNVKKVVGVAENVSNTKTDAEPGSLVPDREMMNSTRDKHEDDWRYLAVTAFLVKCAGSRISVCFVVVACSDATLMLRALILPFRLWFDIALLVPLPAPVLSLQHIIFPICRAYKEKIQVGNVYIAISGSTDGSITFWDLTHNVEAFMQWVSVCDVEKFFDCQKRPRTGRGSQGGRWWRSFSSGLSKKRPDSILVTSKPKEDIDSISEAPHGTSSVPNVSEAMHPDPELEFKTDNSCMETCEIQPLSLLRNIHQSGVNCLHVSEIKGCQSTHSCQVYSVVSGGDDQALHHLVVELSPKSINLDNGILAPDITHLVSVPESRKSIHFQNQSKNYEIKFLNSENFPSAHSASVKGVWTDGSWVFSTGLDQRVRCWNLHQRKLIEHAHLIVSVPEPEALSARACGRNHYQIAVAGRGMQIVDFSGS* 1376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0462 1375 ProSiteProfiles Trp-Asp (WD) repeats profile. 250 281 IPR001680 GO:0005515
Lja1g0462 1375 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 250 281 - -
Lja1g0462 1375 Gene3D - 248 607 IPR015943 GO:0005515
Lja1g0462 1375 MobiDBLite consensus disorder prediction 1127 1142 - -
Lja1g0462 1375 ProSiteProfiles Trp-Asp (WD) repeats profile. 146 172 IPR001680 GO:0005515
Lja1g0462 1375 SUPERFAMILY WD40 repeat-like 29 372 IPR036322 GO:0005515
Lja1g0462 1375 SUPERFAMILY WD40 repeat-like 529 1335 IPR036322 GO:0005515
Lja1g0462 1375 Gene3D - 611 921 IPR015943 GO:0005515
Lja1g0462 1375 Gene3D - 2 247 IPR015943 GO:0005515
Lja1g0462 1375 PANTHER WD REPEAT PROTEIN 23 1374 - -
Lja1g0462 1375 MobiDBLite consensus disorder prediction 1145 1159 - -
Lja1g0462 1375 MobiDBLite consensus disorder prediction 1119 1172 - -
Lja1g0462 1375 SMART WD40_4 116 163 IPR001680 GO:0005515
Lja1g0462 1375 SMART WD40_4 293 330 IPR001680 GO:0005515
Lja1g0462 1375 SMART WD40_4 769 822 IPR001680 GO:0005515
Lja1g0462 1375 SMART WD40_4 332 372 IPR001680 GO:0005515
Lja1g0462 1375 SMART WD40_4 1283 1326 IPR001680 GO:0005515
Lja1g0462 1375 SMART WD40_4 503 545 IPR001680 GO:0005515
Lja1g0462 1375 SMART WD40_4 847 897 IPR001680 GO:0005515
Lja1g0462 1375 SMART WD40_4 241 282 IPR001680 GO:0005515
Lja1g0462 1375 Pfam WD domain, G-beta repeat 247 281 IPR001680 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0462 K24737 - gmx:100780968 2199.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0462 1 4097875 4107420 Lja1g0462 1 4097875 4107420 ECH