Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0454 ATGGCGATTGCGAGAACGCACATGTTTGGTGTTGTGAATTTTCAGCTCAACGAAGCTCCAATGGCTTTTGCAGGTTCCAGCGCGATCCTCTGGCATCACGGAGAGCGTTCGCAGCGCAATGTGGCCCTAAGACGCAGAGGAAATGCCATGATTGTTCCCAGAATCAGAGCTCAGAGTTCTGCTTCTGAATATGTTCCAGATTCCAAGTTTTACAAAGTGGAAGCAATTCTCAGGCCCTGGCGAGTCCCTCTTGTTTCTTCGGCTTTGTTGAATATGGGAATCCGTGGTGTCACTGTATCTGATGTCAGAGGCTTTGGTGCTCAGGGTGGTTCAAAAGAGAGGCAGGGAGGCTCTGAATTTTCTGAAGACAATTTTGTTGCCAAAGTTAAAATGGAAATAGTGGTGAGAAATGACCAGGTTGAGGCTGTGATAGACAAAATAATTGAGGAGGCAAGGACTGGGGAGATTGGTGATGGCAAAATTTTCTTGATCCCAGTGTCAGATGTTATAAGAGTTCGCACAGGTGAGCGTGGGGAACAGGCAGAGAGGATGACTGGGGGGCGAACTGACATATTATCTACTGTATGA 588 0.4728 MAIARTHMFGVVNFQLNEAPMAFAGSSAILWHHGERSQRNVALRRRGNAMIVPRIRAQSSASEYVPDSKFYKVEAILRPWRVPLVSSALLNMGIRGVTVSDVRGFGAQGGSKERQGGSEFSEDNFVAKVKMEIVVRNDQVEAVIDKIIEEARTGEIGDGKIFLIPVSDVIRVRTGERGEQAERMTGGRTDILSTV* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0454 195 ProSitePatterns P-II protein C-terminal region signature. 153 166 IPR017918 GO:0006808|GO:0030234
Lja1g0454 195 PANTHER NITROGEN REGULATORY PROTEIN P-II HOMOLOG 38 191 - -
Lja1g0454 195 Gene3D - 58 191 IPR015867 -
Lja1g0454 195 PRINTS P-II protein signature 153 173 IPR002187 GO:0006808|GO:0030234
Lja1g0454 195 PRINTS P-II protein signature 122 145 IPR002187 GO:0006808|GO:0030234
Lja1g0454 195 PRINTS P-II protein signature 71 86 IPR002187 GO:0006808|GO:0030234
Lja1g0454 195 PRINTS P-II protein signature 92 110 IPR002187 GO:0006808|GO:0030234
Lja1g0454 195 SMART P_II_3 73 175 IPR002187 GO:0006808|GO:0030234
Lja1g0454 195 Pfam Nitrogen regulatory protein P-II 71 178 IPR002187 GO:0006808|GO:0030234
Lja1g0454 195 ProSiteProfiles P-II protein family profile. 70 182 IPR002187 GO:0006808|GO:0030234
Lja1g0454 195 SUPERFAMILY GlnB-like 71 181 IPR011322 -
Lja1g0454 195 PANTHER NITROGEN REGULATORY PROTEIN P-II 38 191 IPR002187 GO:0006808|GO:0030234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0454 - - gmx:100499915 303.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0454 1 4024745 4028627 Lja1g0454 1 4024745 4028627 ECH