Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0450 ATGGATGCGAAGGATATCCTGGGATTAACCAGACACTCATTCTCACTCGAGAAGAAGCCTCGTCCTCCCAAAGAATCTCAGAGAAAACCAGATGGCATTTCGCGCGAGGTGTATGCGCTTACTGGTGGATTACCATCTCTTATGCCCGCAATCGATTCCTCTCAATTCAAGAAAAAGCCTCCTCCTGATGAAAAGATCACTTGGCAATGGCTTCCTTTCACCAGTTCTGCTCGTAAAGATAATCTTCAACTTTACCATTGGGTTCGTGTCGTCAATGGTGTTCCCCCTACAGGGGATTATTCTTTTGCCAAGTATAACAAGTCTGTTGACATTATCAGATACACAGATGAGGAGTATGACAAGCATTTGACCAATCCGATGTGGACCAAGGAGGAGACGGATGAACTGTTTGACTTGTGTGAGAGGTTCGATCTCCGATTTATTGTAATTGCTGATAGGTTCCCATCATCTCGGACTGTAGAAGAATTAAAGGATCGATATTATAGTGTATCTCGGGCTATATTAATTGCAAGGGCTCCATCTGCAGGAGACGTTGCCACACATCCTGTTGTTAAGCAACCATATAAAGTTTCACAAGAAGTGGAACGAAAACGAGCACTGTCCGTGGTGCTTTCTCAAACAAGGCAACAAGAGCGAAGAGATGAAGAGGTTATCATTGAAGCAAAAAAAATATCTGAATTGCGCGTGTCTTCTAAGGTTGCTGAAGAGTCTCAGTTGGCTGTAACTTCGAATGCTGGTGCAGAATTTTCAGAGGGGGTCATCCCTGGTGACATTGTTTCTCCATTGAATGTGCCTTCCACATCACCAGACAATGCATCTATTCTAGCTTCTCTTCGCATGCTTCGTGCATATTCAAGAATGTATGCACTTGAGCAAATGGTACAAGCCGGAAACTCAACTACTGGACTTCGGACCGTCAAACGGATTGAGCAAACTTTGCAAGATCTTGGGGTCAATTTGAAACCAAAGGTTCCAACGAAAGCTGTTTGTGCAGAGCATCTTGAACTAAGAAAAGAAATACTAACTTGGTTGAATCTCCAGAGACAGGTGCAATATAAGGAGGCTGAGGGTTCATCTCTCCGTGATGGGACATACGGTGAATCACCAGGCACACCAAAGCATTTGCATTGTGCTGGGGATCAGGATCGTACATTTATTCCGGACTTCATGAATTTTGGAGGCGAAAGGGTTGGCAAAAAGGACCACAAGCGCAAGGGACCGTCATCAGGTCATAAAAGACCTAAAAAACAGAAGGCCTCAGATTTCTAG 1290 0.4426 MDAKDILGLTRHSFSLEKKPRPPKESQRKPDGISREVYALTGGLPSLMPAIDSSQFKKKPPPDEKITWQWLPFTSSARKDNLQLYHWVRVVNGVPPTGDYSFAKYNKSVDIIRYTDEEYDKHLTNPMWTKEETDELFDLCERFDLRFIVIADRFPSSRTVEELKDRYYSVSRAILIARAPSAGDVATHPVVKQPYKVSQEVERKRALSVVLSQTRQQERRDEEVIIEAKKISELRVSSKVAEESQLAVTSNAGAEFSEGVIPGDIVSPLNVPSTSPDNASILASLRMLRAYSRMYALEQMVQAGNSTTGLRTVKRIEQTLQDLGVNLKPKVPTKAVCAEHLELRKEILTWLNLQRQVQYKEAEGSSLRDGTYGESPGTPKHLHCAGDQDRTFIPDFMNFGGERVGKKDHKRKGPSSGHKRPKKQKASDF* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0450 429 MobiDBLite consensus disorder prediction 362 429 - -
Lja1g0450 429 Pfam SANT/Myb-like domain of DAMP1 100 174 IPR032563 -
Lja1g0450 429 Gene3D - 97 183 - -
Lja1g0450 429 PANTHER DNA METHYLTRANSFERASE 1-ASSOCIATED PROTEIN 1 FAMILY MEMBER 2 428 IPR027109 GO:0006281|GO:0006338|GO:0035267|GO:0043967|GO:0043968
Lja1g0450 429 SUPERFAMILY Homeodomain-like 123 173 IPR009057 -
Lja1g0450 429 SMART sant 124 173 IPR001005 -
Lja1g0450 429 MobiDBLite consensus disorder prediction 1 32 - -
Lja1g0450 429 PANTHER BNAA04G26950D PROTEIN 2 428 - -
Lja1g0450 429 MobiDBLite consensus disorder prediction 1 34 - -
Lja1g0450 429 Pfam DNA methyltransferase 1-associated protein 1 (DMAP1) 309 369 IPR008468 GO:0005634|GO:0045892
Lja1g0450 429 CDD SANT_DMAP1_like 128 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0450 Lja-Chr1 3979725 3986369 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0450 K11324 - gmx:100818926 701.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0450 1 3979725 3986369 Lja1g0450 1 3979725 3986369 ECH