Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0448 ATGGCGTCTCTAACCTCCATTTCTTCGATGATGAAATTCACAGTTCATCAAAACCTTCATCATCTGAATTCAACAGTTACCAATTTCACAAAGAGAACCTCAAGCACCATCAGATTCGCTTCTTCAACCAATCAGAACCAGTCTTCTTCTTCTCCTTCTCCGGGATTGTACTCCGCCGCGAAAATCGACCTAACCGCTCCCAACGTCGACCTCGTCCTCGAAGATGTCCGGCCATATCTCATCTCCGACGGCGGCAACGTCGAAGTCGTTTCCGTCGAGAACGGCGTCATTTCTCTCAAGCTCCAAGGAGCATGCGAAAGCTGCCCTAGCTCAACCACAACCATGAAATTGGGGATCGAGCGCGTTCTCAAGGAGAAATTCGGAGATGCGGTTAAAGATATAGTGCAAGTCTATGATGAAGAACCAAAAGAAACCACTGTTGAGGCTGTGAATAATCATCTTGAGATATTGAGACCTGCTATCAAGAATTTTGGAGGGAGTGTGCAGGTGTTGTCTGTTGAAGGCAGTGACTGTCATGTGGATTATGTTGGACCTGACTCCATTGGATCAGGAATCAAAGCTGCTATCAAGGAGAAGTTTCCAGATATTCTCAATGTTACCTTCACCACCAGTGTATGA 639 0.4617 MASLTSISSMMKFTVHQNLHHLNSTVTNFTKRTSSTIRFASSTNQNQSSSSPSPGLYSAAKIDLTAPNVDLVLEDVRPYLISDGGNVEVVSVENGVISLKLQGACESCPSSTTTMKLGIERVLKEKFGDAVKDIVQVYDEEPKETTVEAVNNHLEILRPAIKNFGGSVQVLSVEGSDCHVDYVGPDSIGSGIKAAIKEKFPDILNVTFTTSV* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0448 212 PANTHER IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED 13 209 - -
Lja1g0448 212 Gene3D - 146 208 IPR034904 -
Lja1g0448 212 Pfam NifU-like domain 70 129 IPR001075 GO:0005506|GO:0016226|GO:0051536
Lja1g0448 212 Gene3D - 61 145 IPR034904 -
Lja1g0448 212 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 68 139 IPR034904 -
Lja1g0448 212 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 144 209 IPR034904 -
Lja1g0448 212 PANTHER NIFU-LIKE PROTEIN 1, CHLOROPLASTIC 13 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lja1g0448 Lja-Chr1 3973613 3975134 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0448 K22074 - mnt:21401733 270.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0448 1 3973613 3975134 Lja1g0448 1 3973613 3975134 ECH