Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0442 ATGGCGAATAGACCCGATCCTGATAATGATGATGATTTTCTTGAGCTTTATAAGGAGTACACTGGCCCATTAGGATCTACTGCTGCTACGAATACTCAAGAGGGGGCAAAATCAAACAAGAGGTCTAATGCAGGGTCTGATGAAGAGGACGAACCGAGGGACCCTAATGCCGTCCCGACCGATTTCACCAGCAGAGAAGCTAAGGTTTGGGAGGCTAAGTCGAAGGCTACTGAGAGGAATTGGAAGAAGAGGAAAGAGGAAGAAATGATCTGCAAATTATGTGGAGAGTCAGGGCATTTCACTCAGGGTTGTCCATCTACCCTTGGAGCAAACCGCAAGTCTCAAGATTTCTTTGAGAGGATACCTGCAAGAGACAAAAATGTAAGAGCGCTTTTCACGGAGAAAGTTATAAGCAAGATTGAAAGGGATACTGGCTGCAAAATTAAGATGGATGAGAAGTTCATTATTGTCAGCGGTAAGGATAGATTGATTTTCTCCAAAGGTGTTGATGCTGTGCACAAGGTTAGAGAGGAGGGTGATCAGAAGGGAACTTCTAGTTCTCACAGGAGCAAGTCAAGGTCACCAGAGAGAAGTCCAGTTAGTGCTCGGTTTAATCGCTCTGAGCCCCAAAGATCTCATTCTGGACCACGAAGTTCATCTCAGTTTCAACAAAGGTTTAGCAGGCCAGAGAGGGTTGTTGAAGACCGTGTCCGGGAGGACGTTCAAAAGTTTGCTAGAGGTTCTCCACAAGCTTATGGAAATAGTGGAGCTAGAGGTCGTTCAAGCCACTCAAGATCTCCAAGACAGGCCCCTTATCCAGGGAATTCATATAATTCATTTGATGGTCGTAATGAAAACATGGGTACTTATAGGAATGATGGGTGGGATTCTCATAGAAGAGAATCTGGTTTCCAACCTGGTCATCAGTTGGATTACAGTGCCTCCCCTCAGACTTTAGAAGAATTAGAGTTGGAGTATAAGAACGAGGCAGTGGAGCTAATGAAAAGTCGCGACCGAGAAGAAGATGAAGAAAATTTCAAGCATCGCGAGGCTATTAGAGATTTGAGAGAGAAGTACATGAGTAAAGTTGCTTTATTGAGGGCTACACATGCAAAAAAATGGGATGAATTTCTTCAGCTTGATGCCCGGAGGTGTCAACAGCAGGCAATCCAACACATGCCCCCTTCTGGTTATCGGGGTTATAAACAGCAGAATTTTTCCGAATATGATGGGTCCACTGCCAATCCTCCCTATGCTGGAACCAATTTTCCCATGGAACCAAAGAACAGGTTCTCAGACACTATGGAGACTTATCCTACGAGGTCTCATGATAACTTTGGTGAATTTCAGAGGCGTGGAGATTTTGCAAAAGCATACAACAGATATTAA 1389 0.4442 MANRPDPDNDDDFLELYKEYTGPLGSTAATNTQEGAKSNKRSNAGSDEEDEPRDPNAVPTDFTSREAKVWEAKSKATERNWKKRKEEEMICKLCGESGHFTQGCPSTLGANRKSQDFFERIPARDKNVRALFTEKVISKIERDTGCKIKMDEKFIIVSGKDRLIFSKGVDAVHKVREEGDQKGTSSSHRSKSRSPERSPVSARFNRSEPQRSHSGPRSSSQFQQRFSRPERVVEDRVREDVQKFARGSPQAYGNSGARGRSSHSRSPRQAPYPGNSYNSFDGRNENMGTYRNDGWDSHRRESGFQPGHQLDYSASPQTLEELELEYKNEAVELMKSRDREEDEENFKHREAIRDLREKYMSKVALLRATHAKKWDEFLQLDARRCQQQAIQHMPPSGYRGYKQQNFSEYDGSTANPPYAGTNFPMEPKNRFSDTMETYPTRSHDNFGEFQRRGDFAKAYNRY* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0442 462 MobiDBLite consensus disorder prediction 24 40 - -
Lja1g0442 462 MobiDBLite consensus disorder prediction 66 81 - -
Lja1g0442 462 Coils Coil 319 339 - -
Lja1g0442 462 MobiDBLite consensus disorder prediction 393 419 - -
Lja1g0442 462 ProSiteProfiles Zinc finger CCHC-type profile. 91 106 IPR001878 GO:0003676|GO:0008270
Lja1g0442 462 MobiDBLite consensus disorder prediction 41 56 - -
Lja1g0442 462 MobiDBLite consensus disorder prediction 228 243 - -
Lja1g0442 462 PANTHER OS01G0252900 PROTEIN 1 462 - -
Lja1g0442 462 MobiDBLite consensus disorder prediction 175 196 - -
Lja1g0442 462 MobiDBLite consensus disorder prediction 197 227 - -
Lja1g0442 462 MobiDBLite consensus disorder prediction 393 427 - -
Lja1g0442 462 MobiDBLite consensus disorder prediction 254 286 - -
Lja1g0442 462 PANTHER OS01G0252900 PROTEIN 1 462 - -
Lja1g0442 462 SUPERFAMILY Retrovirus zinc finger-like domains 78 110 IPR036875 GO:0003676|GO:0008270
Lja1g0442 462 MobiDBLite consensus disorder prediction 1 81 - -
Lja1g0442 462 MobiDBLite consensus disorder prediction 1 17 - -
Lja1g0442 462 MobiDBLite consensus disorder prediction 175 308 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0442 - - gmx:100806099 792.727
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0442 1 3937145 3940865 Lja1g0442 1 3937145 3940865 ECH