LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lja1g0433	ATGTCAATCAGCGACGCTTTCCTCTGCTTCCTATTCATCGCCGCAACCTATTCGATTTCTTCTGCTTCCGCTGATTCCATCTATGGCTGCGGTGGATTTGTTCAGGCAAGCTCATCGTTGGTGAAATCTAGGAAACAAACTGATGCCAAATTGGATTATTCACATGTCATGGTTGAGCTTCAAACAGTCGATGGACTGGTAAAGGATAGAACACAGTGTGCTCCGAATGGATACTATTTTATTCCAGTGTACGACAAGGGTTCCTTTGTAATTAAAATTAATGGACCTGAAGGATGGTCATGGGATCCTGAAAAGGTTCCTGTGGTGGTTGACAATGATGGATGCAATGGCAATGAAGATATCAATTTTCGTTTCACAGGGTTTGCTATATCTGGTAGAGTTGTGGGAGCTGTAGGTGGAGAGAGCTGTTCAGTTAAAAATGGAGGTCCTTCAAATGTAAAAGTTGATTTATTGTCTCCTTCTGGTGATCTTGTCTCTTCAGTCTTAACTTCATCATCAGGGAGTTACTTGTTTACAAATATAATTCCAGGAAACTATGAACTACGTGCTTCAAACCCTGATATGAAAGTTGAAGTTAAAGGTTCAACGCAGGTGGAGTTGGGCTTTGGAAATGGGGTAGTTGATGATGTTTTCTTTGTCCCTGGATATAGTATCAGCGGGTTTGTTGTTGCTCAGGGAAATCCTATATTAGGAGTCCATATTTTCTTATATTCAGATGATGTGTCTGAGGTAGAATGTTCACAAGGTTCTGCTCATGGTCCCCGCCAAGAAGCAGCTCTTTGTCACGCTGTATCGGATGCTGATGGAAAGTTCATATTCAATTCAATACCTTGTGGAACTTATGAACTTGTGCCCTACTATAAGGGTGAGAATACAGTATTTGATGTTTCACCGTCCAGTGTCTCAATTAATGTCAAGCATCAACATGTACCCGTGACTCAAAAATTCCAGGTAACTGGATTTTCTGTTGGAGGCCGTGTAGTTGATGGATACGACATGGGAATAGAGGGTGTTAAGATCATAGTTGATGGGCATGAAAGGTCTATTACTGACAATCAAGGATATTATAAGCTTGATCAGGTTACGTCCAAGCACTATACCATAGAGGCCCGAAAGGAGCATTACAAGTTCAAGAAGTTGGTGAATTATATGGTATTGCCCAACATGGCTTCAATAGAAGACATTAATGCCGTTTCATACGATCTTTGTGGTTTAGTTAGGATGGTTAGCAGTGGTCTGAAAGCAACGGTGGCTTTGACTCATGGGCCTGATAATGTAAAACCACAAAAGAAACAAACAGATGGAAATGGAAATTTCTGCTTTGAGGTTCTGCCTGGTGAATATCGCTTGTCTGCTATTGCTGCTACTCCTGAGAATGTAGCTGGACTCATATTTGCCCCATCTTATATCGATGTTGTGGTCAAAAGTCCATTGTTGAATGTTGAATTTTCACAGGCTCTGGTCAATGTTCGGGGTGCTGTATCCTGCAAGGAGACATGTGGTCCATCAGTATCTGTTACTCTTGTTAGACAGGTTGATAAGCATAATGATGAGAGAAGGACAATTAGCTTGACCACTGAGAGTAGTGAATTTCTGTTTTCAGATGTTATTCCTGGAAAATACAGGCTTGAGGTTAAACATAGTTCCCCTGATTCAGTGGCCATGGAAGATAATTGGTGCTGGGAGCAGAGCTTCTTAGATGTAAATGTTGGTGCTGAGGACTTAGAAGGAATTTTTTTTGTTCAAAAAGGCTTTTGGGTCAATGTTATCTCCACTCATGATGTTGATGGTTACATGACTCAACCAGATGGGTCAACTGTGACTTCAAAGATTCGGAAAGGTTCCCAGCATATATGTGTCGAATATCCTGGAGTACATGAATTTAGTTTTATTGACTCATGTATTTTCTTTGGGAGCTCACCAGTGATAATTAATACGTCTAACCTATCGCCCATCCATCTAAAAGGAGAGAAGTATCTTCTTAAAGGACAGATAAATTTGCAGTCCGGCTCACTTGATACATTGCCTGAGAGTATAGTTGTTGATGTTTATCATGATGGAGCTGGTGTTATTGATAAGGCTACAGCTATACTTAAGTCTCATGGGAAAGATCAAACAGATGCTGCTGTATTTGAGTATTCTGTTTGGGCCAATCTAGGGGAAAAACTTACCTTTGTTCCTCGAGACTCAAGGAATGACGTGGAGAAAAAACTTCTATTTTATCCTAGAGAACATCATGTATCACTGACAGACGATAATTGCCAAGCTTCTATTCCTGCATTTTCCTGTCGACTGGGTGTATATATTGAAGGATCAGTTTCACCTCCTATTTCTGGGGTTCATATTAGGATTTTTGCTGCTGGAGACAGCAGCACCACTGAATTTAAAAGTGGTGAATTAGTACTTGAAACAATCACTGGAACTGATGGCTCCTTTGTGGCTGGTCCTCTGTATGATGATGTTGGTTACAATGTTCAGGCTTCAAAGCCTGGTTATCATTTAAAACAAGTTGGGCCTCATTCCTTTAGTTGTCAGAAGCTTAGTCAAATTTCAGTGCACATACATCACAAAGATGATGTTAAAGAACTGATTCCTTCTGTTCTATTATCTTTGAGTGGCGACAATGGTTATAGAAACAATTCCGTATCTGGAGCTGGAGGGACATTTATATTTGATAACCTGTTTCCTGGGATGTTTTATTTGCGTCCTGTTATGAAGGAGTATGCTTTCTCACCTTCGGCACAGGCAATAGAGCTTGGAGCTGGGGAGTTTAAAGAAGTTATTTTCCAGGCCACCCGCGTAGCTTACAGTGCTACAGGCTTAGTAACTCTGTTGTCTGGTCAACCCAAAGGTGGAGTTTCAGTTGAAGCACGGTCAGAGTCAAAAGGCTATTTTGAGGAAACAGTGACAGATTCCTCTGGGAATTATCGTCTGAGAGGACTATTGCCTGATACTGTCTATGATGTCAAAGTAGCTAAAAGGGATGTTATGGGGAGTTCTAATGTAGTGCGTGCATCTCCAGATTTCATTACTGTCAAGGTTGGAACTGAAGATATCAAGGGTTTGGATTTCATAGTTTTTGAGGAGCCGGAAATGACAATTGTAAGTTGCCACGTCGAAGGAAATGGTACAGATGAACTTCGTAAACACCTGATGGTAGAAATCAGGTCAGCTAGTGACACAACCAAGATAGAGTCCGTCTTTCCCTTGCCGATTTCTAACTTCTTCCAAGTGAAGGGCTTATCAAAGGGCAGACACCTTCTGCAGCTTCGATCTGGTCTCCCGTCAAGCTCACTTCAATTTGAATCCGATATCATTGAGGTCGACTTGGACAAAAATATTCAAATCCATGTAGGCCCATTGAGATTCAGAATTGTAGATCAGCTGAAGCAGGAGTTGACTCCTGCACCCGTGTTCCCCCTTATTGTTGGATTTCTAGTTGTTGCGCTATTTCTCAGCATGCCTAGGTTGAAGGATTTGTACCAAGCCACGGTAGACATACCTACACCAGGACTTGGTGGGGCTTCAAAAAAAGACATTAGGAAGCCTATATTGCGAAAGAAGACTTACTAA	3594	0.4143	MSISDAFLCFLFIAATYSISSASADSIYGCGGFVQASSSLVKSRKQTDAKLDYSHVMVELQTVDGLVKDRTQCAPNGYYFIPVYDKGSFVIKINGPEGWSWDPEKVPVVVDNDGCNGNEDINFRFTGFAISGRVVGAVGGESCSVKNGGPSNVKVDLLSPSGDLVSSVLTSSSGSYLFTNIIPGNYELRASNPDMKVEVKGSTQVELGFGNGVVDDVFFVPGYSISGFVVAQGNPILGVHIFLYSDDVSEVECSQGSAHGPRQEAALCHAVSDADGKFIFNSIPCGTYELVPYYKGENTVFDVSPSSVSINVKHQHVPVTQKFQVTGFSVGGRVVDGYDMGIEGVKIIVDGHERSITDNQGYYKLDQVTSKHYTIEARKEHYKFKKLVNYMVLPNMASIEDINAVSYDLCGLVRMVSSGLKATVALTHGPDNVKPQKKQTDGNGNFCFEVLPGEYRLSAIAATPENVAGLIFAPSYIDVVVKSPLLNVEFSQALVNVRGAVSCKETCGPSVSVTLVRQVDKHNDERRTISLTTESSEFLFSDVIPGKYRLEVKHSSPDSVAMEDNWCWEQSFLDVNVGAEDLEGIFFVQKGFWVNVISTHDVDGYMTQPDGSTVTSKIRKGSQHICVEYPGVHEFSFIDSCIFFGSSPVIINTSNLSPIHLKGEKYLLKGQINLQSGSLDTLPESIVVDVYHDGAGVIDKATAILKSHGKDQTDAAVFEYSVWANLGEKLTFVPRDSRNDVEKKLLFYPREHHVSLTDDNCQASIPAFSCRLGVYIEGSVSPPISGVHIRIFAAGDSSTTEFKSGELVLETITGTDGSFVAGPLYDDVGYNVQASKPGYHLKQVGPHSFSCQKLSQISVHIHHKDDVKELIPSVLLSLSGDNGYRNNSVSGAGGTFIFDNLFPGMFYLRPVMKEYAFSPSAQAIELGAGEFKEVIFQATRVAYSATGLVTLLSGQPKGGVSVEARSESKGYFEETVTDSSGNYRLRGLLPDTVYDVKVAKRDVMGSSNVVRASPDFITVKVGTEDIKGLDFIVFEEPEMTIVSCHVEGNGTDELRKHLMVEIRSASDTTKIESVFPLPISNFFQVKGLSKGRHLLQLRSGLPSSSLQFESDIIEVDLDKNIQIHVGPLRFRIVDQLKQELTPAPVFPLIVGFLVVALFLSMPRLKDLYQATVDIPTPGLGGASKKDIRKPILRKKTY*	1198

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lja1g0433	1197	SUPERFAMILY	Cna protein B-type domain	868	922	-	-
	Lja1g0433	1197	SUPERFAMILY	Carboxypeptidase regulatory domain-like	328	395	IPR008969	-
	Lja1g0433	1197	PANTHER	CARBOXYPEPTIDASE REGULATORY REGION-CONTAINING	3	1176	-	-
	Lja1g0433	1197	Gene3D	-	335	405	-	-
	Lja1g0433	1197	SUPERFAMILY	Starch-binding domain-like	219	298	IPR013784	GO:0030246
	Lja1g0433	1197	SUPERFAMILY	Starch-binding domain-like	943	1004	IPR013784	GO:0030246
	Lja1g0433	1197	Gene3D	Immunoglobulins	144	216	IPR013783	-
	Lja1g0433	1197	PANTHER	NODAL MODULATOR 1-RELATED	3	1176	-	-
	Lja1g0433	1197	SUPERFAMILY	Hypothetical protein PA1324	117	196	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lja1g0433	-		-	ccaj:109814730	2114.35

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lja1g0433	1	3815498	3827475	Lja1g0433	1	3815498	3827475	ECH