Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lja1g0430 ATGGATGATTTAGGCTCTACTACCGGTTTTGATGGTCTCAGCAATGCTGTGAGGAGGAAGAGGAGTCAAACTTCGCGCAGGCCTCGACCTGATTCACAGCCTGTTTCTGAAGGTCATGAACTGTCTCCCTTGTCGTCGACGCCTTCAGAAGATGCCGGCAAGGCCTCTAGTGACGAAAATGCTGTTTACGATACTAGTTCCAAGAGGAAAGAATTCAATCTTAACTCTCATGCCTCCTCTGCTACCAGAGCCGACGACGATAAATCACATAGAAGAGGTTTCCATGCTTTTTATAATAGTGAGCCTGGACGGAGCGGTTCATTTAATAGACGCAGTAGTGAAGGTGTTCTTGCTCCAGCTAATTGGAAAGGTTCTAGCAAATTCAAGGATAGCTTGGATTCAGAGCTAAGCAATGCAGATGTTTATGGTGGGAGGAGTTTCGAGGGTCCGAGTCTGGGGCAGTTTGGCATTTCTCAGGATGGATTGGGGAATGAGAACAGGGTTAAGAAGGTTAAACTGAAGGTTGGCGGGGTGACGCGTACTATACAAGCCAACTCTGCATCCAATGGTGGTTCAGGAAGTGGATCAGCTACAAAAAGCTCTCGCTCATCAGATGCGCCGAGGCCACGCCAAAAGCAACAGAGTAATTCAGACGACAATAATTCTCCTTCTGATAAGAGGAGTGGCCTCCAAGGCCTTCCGTGGAAGGATTTTTCAAGGGGTGGCTTTGGTCTTGGGAAGGAGGATTCAATGGGGAGGATATCTGGAAAGAACACATCTGGTAAGCAAGGAGACAAGTCTGAACCAGTTCGGAAGAGCAAGCGAGTGCCGAAGAGACGTGTGCTAGATGGGGAATTTGGTGATGAAGACGACGAGGATGATGAGATTCGGTACTTGGAAAAGCTGAAAACTTCAAAAGTTTCTGCAGTTTACAGAGATGAAGAAGAATTAAGCAAGAAACATCGAAAACTCTCCAGTGTCTCTAATATGGAAAATGCTGCCTCATCAAGGTCAGGCAAAGATGGTAAGAAAAGGTCTAGATCTGATAGAGTGTATGAGGATACAGATTATGAGGGTGAAGAGGAATCAGGGTCTGATGGTGAGCTTGAGGATAAGAAAAAGAAAAAACAGAAGAAGGAATCTGTTGATGTATTAATGGACAGTAAGAGGGAAATGACTCTTACAACACGTCAACGGGCTCTTCAATCAAGCAGAGATGCTTGTGCAACTGGTGGAAGTCTAATTGAGTTTCCCAATGGATTACCACCTGCTCCGTCTAGAAAGCAAAAGGAGAAGCTTTCCGAAGTGGATCAGCAAGTAAAGAAAGCTGAGGCTGCACAGAGGCGTAAAATGCAGGTTGAAAAGGCTGCCAGGGAATCTGAGGCTGAAGCTATCCGAAAAATTCTTGGTCAAGACTCCAGTAGGAAGAAGCGAGAAGATAAAATTAAGAAACGCCAAGAAGAACTGGCACAGGAGAAGGCAGCCAATGCTCAAAAACTTCCACCAAATACCATCAGATATGTGATGCGTCCTACTGGGACAACTTTGACTTTCCCTGAGGAGATGGGGCTCCCTGCTATTTTTAACTCCAAGCCAATCAGTTATCCTCCCCCTCGTGAGAAGTGTGCTGGTCCTTCTTGTACGAATCCGTACAAGTATCGGGATTCGAAAACGAAGGTTCCTCTTTGCAGTCTCCAATGCTATAAGGCTGTCCAGGGGAAGACGGCAGATGAGATTGTCCAGGAGAAGATGGCAGCTGAGGCTGTACAGGAGAAGACGGAAGCTGAGGCTGTACAGGAGAAAACGGCAGCTGAGGCTGTACAGGAGATGACGGCAGCTGAGCTTGTACAGGAGAAGACGGCAGCTGCGCCTGAAACTATGTCTTGA 1887 0.4685 MDDLGSTTGFDGLSNAVRRKRSQTSRRPRPDSQPVSEGHELSPLSSTPSEDAGKASSDENAVYDTSSKRKEFNLNSHASSATRADDDKSHRRGFHAFYNSEPGRSGSFNRRSSEGVLAPANWKGSSKFKDSLDSELSNADVYGGRSFEGPSLGQFGISQDGLGNENRVKKVKLKVGGVTRTIQANSASNGGSGSGSATKSSRSSDAPRPRQKQQSNSDDNNSPSDKRSGLQGLPWKDFSRGGFGLGKEDSMGRISGKNTSGKQGDKSEPVRKSKRVPKRRVLDGEFGDEDDEDDEIRYLEKLKTSKVSAVYRDEEELSKKHRKLSSVSNMENAASSRSGKDGKKRSRSDRVYEDTDYEGEEESGSDGELEDKKKKKQKKESVDVLMDSKREMTLTTRQRALQSSRDACATGGSLIEFPNGLPPAPSRKQKEKLSEVDQQVKKAEAAQRRKMQVEKAARESEAEAIRKILGQDSSRKKREDKIKKRQEELAQEKAANAQKLPPNTIRYVMRPTGTTLTFPEEMGLPAIFNSKPISYPPPREKCAGPSCTNPYKYRDSKTKVPLCSLQCYKAVQGKTADEIVQEKMAAEAVQEKTEAEAVQEKTAAEAVQEMTAAELVQEKTAAAPETMS* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lja1g0430 628 MobiDBLite consensus disorder prediction 38 80 - -
Lja1g0430 628 MobiDBLite consensus disorder prediction 296 326 - -
Lja1g0430 628 PANTHER INO80 COMPLEX SUBUNIT B 1 576 IPR029523 GO:0006338|GO:0031011
Lja1g0430 628 MobiDBLite consensus disorder prediction 428 492 - -
Lja1g0430 628 MobiDBLite consensus disorder prediction 1 505 - -
Lja1g0430 628 MobiDBLite consensus disorder prediction 395 409 - -
Lja1g0430 628 Coils Coil 426 463 - -
Lja1g0430 628 MobiDBLite consensus disorder prediction 366 394 - -
Lja1g0430 628 PANTHER HIT ZINC FINGER AND PAPA-1-LIKE DOMAIN-CONTAINING PROTEIN 1 576 - -
Lja1g0430 628 Pfam PAPA-1-like conserved region 438 522 IPR006880 GO:0031011
Lja1g0430 628 MobiDBLite consensus disorder prediction 337 354 - -
Lja1g0430 628 Pfam HIT zinc finger 538 569 IPR007529 -
Lja1g0430 628 MobiDBLite consensus disorder prediction 1 19 - -
Lja1g0430 628 MobiDBLite consensus disorder prediction 81 97 - -
Lja1g0430 628 MobiDBLite consensus disorder prediction 264 285 - -
Lja1g0430 628 MobiDBLite consensus disorder prediction 179 228 - -
Lja1g0430 628 SMART PAPA_1_2 437 522 IPR006880 GO:0031011
Lja1g0430 628 Coils Coil 475 495 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lja1g0430 - - lja:Lj1g3v4849460.1 1105.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lja1g0430 1 3794985 3800502 Lja1g0430 1 3794985 3800502 ECH